Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021460.1-P | Field mustard | plasma membrane, plastid | 86.76 | 85.97 |
| CDY34728 | Canola | plasma membrane, plastid | 86.3 | 85.52 |
| Bra021461.1-P | Field mustard | cytosol, extracellular, peroxisome | 57.99 | 79.38 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 57.99 | 79.38 |
| AT4G24310.1 | Thale cress | plastid | 67.58 | 69.48 |
| Solyc01g103580.2.1 | Tomato | plasma membrane | 55.71 | 54.95 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 52.51 | 52.75 |
| PGSC0003DMT400064047 | Potato | plasma membrane | 54.79 | 52.63 |
| VIT_12s0035g00920.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 57.08 | 52.3 |
| Os08t0106501-01 | Rice | plastid | 50.23 | 49.11 |
| TraesCS7D01G320400.1 | Wheat | plastid | 48.4 | 46.29 |
| TraesCS7A01G324500.1 | Wheat | plastid | 47.95 | 46.26 |
| TraesCS7B01G225000.1 | Wheat | plastid | 47.49 | 45.81 |
| HORVU7Hr1G077620.2 | Barley | plastid | 48.86 | 44.03 |
| Zm00001d034995_P001 | Maize | plastid | 44.29 | 41.28 |
| AT5G46090.1 | Thale cress | plasma membrane | 40.18 | 41.12 |
| AT4G18425.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 38.36 | 39.44 |
| EES14365 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 44.29 | 38.8 |
| AT5G27370.1 | Thale cress | plasma membrane | 33.33 | 38.22 |
| AT4G28485.2 | Thale cress | plasma membrane, plastid | 34.7 | 38.0 |
| AT3G21550.1 | Thale cress | plasma membrane | 30.59 | 36.41 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 32.88 | 34.78 |
| AT5G39650.1 | Thale cress | plastid | 35.62 | 31.97 |
| AT1G09157.1 | Thale cress | plastid | 34.25 | 30.86 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821304 | UniProt:A0A178VKN4 | ProteinID:AAF32450.1 | ProteinID:AAT69203.1 | ProteinID:AEE73807.1 |
| ArrayExpress:AT3G02430 | EnsemblPlantsGene:AT3G02430 | RefSeq:AT3G02430 | TAIR:AT3G02430 | RefSeq:AT3G02430-TAIR-G | EnsemblPlants:AT3G02430.1 |
| TAIR:AT3G02430.1 | EMBL:AY600558 | InterPro:DMP | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0008150 | GO:GO:0009705 |
| GO:GO:0009987 | GO:GO:0010256 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | RefSeq:NP_186892.1 |
| ProteinID:OAP06268.1 | PFAM:PF05078 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF10 | UniProt:Q9M897 | TMHMM:TMhelix |
| UniParc:UPI00000A2A7D | SEG:seg | : | : | : | : |
Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
Coordinates
chr3:+:499266..500174
Molecular Weight (calculated)
24071.2 Da
IEP (calculated)
7.450
GRAVY (calculated)
0.258
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.