Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- plasma membrane 2
- plastid 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021461.1-P | Field mustard | cytosol, extracellular, peroxisome | 100.0 | 100.0 |
| AT3G02430.1 | Thale cress | plastid | 79.38 | 57.99 |
| CDY34728 | Canola | plasma membrane, plastid | 76.88 | 55.66 |
| CDY24837 | Canola | plasma membrane, plastid | 63.75 | 46.58 |
| CDY08933 | Canola | plasma membrane | 63.12 | 45.7 |
| CDY03457 | Canola | plastid | 61.25 | 45.37 |
| CDY34278 | Canola | plasma membrane, plastid | 61.25 | 44.55 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 48.12 | 35.32 |
| Solyc01g103580.2.1 | Tomato | plasma membrane | 46.88 | 33.78 |
| VIT_12s0035g00920.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 49.38 | 33.05 |
| PGSC0003DMT400064047 | Potato | plasma membrane | 46.25 | 32.46 |
| Os08t0106501-01 | Rice | plastid | 41.88 | 29.91 |
| TraesCS7D01G320400.1 | Wheat | plastid | 38.75 | 27.07 |
| TraesCS7A01G324500.1 | Wheat | plastid | 37.5 | 26.43 |
| Zm00001d034995_P001 | Maize | plastid | 38.75 | 26.38 |
| TraesCS7B01G225000.1 | Wheat | plastid | 36.88 | 25.99 |
| HORVU7Hr1G077620.2 | Barley | plastid | 38.12 | 25.1 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 33.12 | 24.77 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 33.12 | 24.77 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 33.12 | 24.77 |
| EES14365 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 38.12 | 24.4 |
| CDY38243 | Canola | cytosol | 20.62 | 24.26 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 32.5 | 23.21 |
| CDY60883 | Canola | cytosol | 32.5 | 23.21 |
| CDY44328 | Canola | plasma membrane | 26.25 | 22.7 |
| CDY38623 | Canola | plasma membrane | 26.25 | 22.7 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.12 | 22.5 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.12 | 22.5 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 28.12 | 22.28 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 28.12 | 22.28 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.12 | 22.06 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 27.5 | 22.0 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 27.5 | 22.0 |
| CDY33452 | Canola | plasma membrane | 29.38 | 21.66 |
| CDY37280 | Canola | plasma membrane | 25.0 | 21.62 |
| CDY34571 | Canola | plasma membrane | 28.75 | 21.2 |
| CDX77630 | Canola | plasma membrane | 28.75 | 21.2 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 24.38 | 21.08 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 31.25 | 20.75 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 31.25 | 20.75 |
| CDX74441 | Canola | plastid | 28.75 | 18.85 |
| CDX81135 | Canola | plastid | 27.5 | 18.18 |
| CDY56548 | Canola | plastid | 26.88 | 17.77 |
| CDY30259 | Canola | plastid | 8.12 | 9.77 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY34726 | EnsemblPlantsGene:GSBRNA2T00057254001 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF10 | PFAM:PF05078 |
| ProteinID:CDY34726 | ProteinID:CDY34726.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002544911 | UniProt:A0A078HAK6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g32990DBnaA01g32990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAK6]
Coordinates
chrLK032340:+:252118..253581
Molecular Weight (calculated)
17628.4 Da
IEP (calculated)
6.781
GRAVY (calculated)
0.069
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGLKLRNAN VPVPELDDLS EQLPSETRPE MLTRQTSMSQ RAMPSTLTSA ANLSNLLPTG TLLAFQLLTP VFTSNGVCDH ATRLLTAALL FLLAGPVYGI
101: SGVKAEDGTI YYGFVTHKGM WVVDYPDPSG LGLPDLSKYR MRFVDWIHAT LSVWCLERLR
101: SGVKAEDGTI YYGFVTHKGM WVVDYPDPSG LGLPDLSKYR MRFVDWIHAT LSVWCLERLR
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.