CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025039.1-P	Field mustard	plasma membrane	99.54	99.54
CDY34571	Canola	plasma membrane	98.62	98.62
CDX77630	Canola	plasma membrane	97.7	97.7
AT5G46090.1	Thale cress	plasma membrane	70.05	71.03
CDX76523	Canola	cytosol, peroxisome, plasma membrane	65.44	66.36
CDX76524	Canola	cytosol, peroxisome, plasma membrane	65.44	66.36
CDY55785	Canola	cytosol, peroxisome, plasma membrane	65.44	66.36
CDX77629	Canola	cytosol, peroxisome, plasma membrane	71.89	64.73
CDY70034	Canola	cytosol, peroxisome, plasma membrane	71.43	64.32
CDX78854	Canola	cytosol, peroxisome, plasma membrane	65.44	63.39
CDY60883	Canola	cytosol	65.44	63.39
PGSC0003DMT400081227	Potato	plasma membrane	59.45	61.72
Solyc02g077640.1.1	Tomato	plasma membrane	57.6	59.81
VIT_13s0106g00720.t01	Wine grape	plasma membrane	55.3	56.87
CDY38243	Canola	cytosol	35.48	56.62
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	54.38	55.92
GSMUA_Achr4P10580_001	Banana	cytosol	53.46	55.77
GSMUA_Achr4P02720_001	Banana	plasma membrane	53.92	55.45
KRH20387	Soybean	plasma membrane	53.46	53.46
VIT_10s0003g00320.t01	Wine grape	plasma membrane	57.14	50.61
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	47.93	50.0
CDY29909	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	44.24	48.0
CDY38387	Canola	cytosol, endoplasmic reticulum, plasma membrane	43.78	47.5
CDX92877	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	43.78	47.5
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	45.16	47.12
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	40.55	47.06
CDY35189	Canola	cytosol, endoplasmic reticulum, plasma membrane	43.32	47.0
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	45.16	45.79
HORVU1Hr1G087380.1	Barley	mitochondrion	51.61	45.71
Os05t0562800-02	Rice	plastid	49.31	44.96
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	43.78	43.58
KRH50120	Soybean	peroxisome	41.47	43.27
CDY37280	Canola	plasma membrane	34.56	40.54
CDY44328	Canola	plasma membrane	34.56	40.54
Os06t0352200-01	Rice	plasma membrane, plastid	46.08	39.53
CDY38623	Canola	plasma membrane	33.64	39.46
CDY19288	Canola	extracellular, plasma membrane, vacuole	33.64	39.46
CDY24837	Canola	plasma membrane, plastid	39.63	39.27
CDY34728	Canola	plasma membrane, plastid	39.63	38.91
CDY08933	Canola	plasma membrane	38.71	38.01
CDY03457	Canola	plastid	35.48	35.65
CDY34278	Canola	plasma membrane, plastid	35.48	35.0
CDY37281	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	30.88	33.17
CDY19287	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	29.49	31.68
CDY38622	Canola	endoplasmic reticulum, plasma membrane, vacuole	29.49	31.37
CDY34726	Canola	cytosol, extracellular, peroxisome	21.66	29.38
CDX74441	Canola	plastid	30.88	27.46
CDY30259	Canola	plastid	16.59	27.07
CDX81135	Canola	plastid	29.95	26.86
CDY44329	Canola	endoplasmic reticulum, extracellular, vacuole	5.53	26.67
CDY56548	Canola	plastid	29.49	26.45

Protein Annotations

EnsemblPlants:CDY33452	EnsemblPlantsGene:GSBRNA2T00054689001	GO:A0A078H7P3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	ProteinID:CDY33452	ProteinID:CDY33452.1
TMHMM:TMhelix	UniParc:UPI0004EE0D45	UniProt:A0A078H7P3	MapMan:35.1	:	:

Description

BnaA06g36210DBnaA06g36210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7P3]

Coordinates

chrLK032315:+:914..1666

Molecular Weight (calculated)

23776.8 Da

IEP (calculated)

6.612

GRAVY (calculated)

0.248

Length

217 amino acids

Sequence
(BLAST)

001: METKVDEEAG VNGAGGAIKE EKAPLLKAQE FPEVERNNWI HKAIGQTFQT TAHLANHLPT GTALAYQVLS PVLTNGGRCD FASRYMTEML VSICAFTCFI
101: LSFTDSYRDL NGTVCYGFAT TNGLWIIDGK AVLPKERSKS YRLQFIDFAH AFMTLLVFGA VVMFDHNVVS CFFPKPSAEV AELLTALPVA IGVFCSMMFA
201: TFPTTRHGIG FPLSAHC

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.