Factsheet for TraesCS3B01G273700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	93.58	80.28
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	88.77	77.57
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	76.47	68.75
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	73.8	66.35
GSMUA_Achr4P02720_001	Banana	plasma membrane	65.24	57.82
GSMUA_Achr4P10580_001	Banana	cytosol	62.57	56.25
TraesCS1B01G424300.1	Wheat	plasma membrane	59.89	50.91
VIT_13s0106g00720.t01	Wine grape	plasma membrane	52.94	46.92
Solyc02g077640.1.1	Tomato	plasma membrane	52.41	46.89
PGSC0003DMT400081227	Potato	plasma membrane	52.41	46.89
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	51.34	45.5
KRH55890	Soybean	plasma membrane	49.73	44.93
KRH20387	Soybean	plasma membrane	51.87	44.7
AT5G46090.1	Thale cress	plasma membrane	49.2	42.99
CDY55785	Canola	cytosol, peroxisome, plasma membrane	48.66	42.52
CDX76523	Canola	cytosol, peroxisome, plasma membrane	48.66	42.52
CDX76524	Canola	cytosol, peroxisome, plasma membrane	48.66	42.52
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.13	42.06
PGSC0003DMT400035732	Potato	plasma membrane	49.73	41.7
VIT_10s0003g00320.t01	Wine grape	plasma membrane	54.55	41.63
Solyc10g008970.1.1	Tomato	plasma membrane	48.66	41.55
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	47.06	41.31
CDY33452	Canola	plasma membrane	47.06	40.55
Solyc12g005490.1.1	Tomato	plasma membrane	48.66	40.44
VIT_12s0028g03070.t01	Wine grape	plasma membrane	45.99	40.19
CDY60883	Canola	cytosol	48.13	40.18
Bra025039.1-P	Field mustard	plasma membrane	46.52	40.09
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.59	39.73
CDX78854	Canola	cytosol, peroxisome, plasma membrane	47.59	39.73
CDY34571	Canola	plasma membrane	45.45	39.17
CDX77630	Canola	plasma membrane	44.38	38.25
TraesCS4B01G141000.1	Wheat	plastid	42.25	38.16
CDY70034	Canola	cytosol, peroxisome, plasma membrane	46.52	36.1
CDX77629	Canola	cytosol, peroxisome, plasma membrane	46.52	36.1
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.52	36.1
KRH50120	Soybean	peroxisome	39.57	35.58
TraesCS7B01G225000.1	Wheat	plastid	40.11	33.04
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	35.83	31.46
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	34.76	30.09
CDY38243	Canola	cytosol	20.86	28.68
TraesCS7B01G337100.1	Wheat	plasma membrane	29.41	28.5
TraesCS2B01G068300.1	Wheat	plastid	33.69	27.51
TraesCS2B01G068400.1	Wheat	plastid	32.62	27.35
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	33.16	27.31
TraesCS2B01G068500.1	Wheat	plastid	33.16	27.07
TraesCS3B01G440900.1	Wheat	plasma membrane	31.55	26.58
TraesCS7B01G499200.1	Wheat	vacuole	29.41	26.57
TraesCS6B01G427400.1	Wheat	plastid	32.09	26.32
TraesCS7B01G034700.1	Wheat	plastid	30.48	25.56
TraesCS6B01G427700.1	Wheat	plastid	33.16	25.51
TraesCS7B01G024300.1	Wheat	plastid	31.55	25.32
TraesCS7B01G498900.1	Wheat	plastid	32.09	25.0
TraesCS7B01G399300.1	Wheat	cytosol, peroxisome, plasma membrane	32.62	24.9
TraesCS6B01G427300.1	Wheat	plastid	30.48	24.89
TraesCS7B01G497700.1	Wheat	cytosol, peroxisome, plasma membrane	28.34	24.88
TraesCS7B01G024200.1	Wheat	cytosol, peroxisome, plastid, vacuole	31.55	23.89
TraesCS6B01G427800.1	Wheat	plastid	29.41	23.81
TraesCS7B01G499800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	31.02	23.77
TraesCS6B01G427600.1	Wheat	plastid	28.34	23.35
TraesCS6B01G427500.1	Wheat	plasma membrane	31.02	22.92
TraesCS7B01G498800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	28.88	22.88
TraesCS6B01G469800.1	Wheat	plastid	27.81	21.05

Protein Annotations

EnsemblPlants:TraesCS3B01G273700.1	EnsemblPlantsGene:TraesCS3B01G273700	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:440677186..440677790

Molecular Weight (calculated)

20394.8 Da

IEP (calculated)

7.195

GRAVY (calculated)

0.294

Length

187 amino acids

Sequence
(BLAST)

001: MELQKDQSHP LLSNRTDGTD NMSPVQKAIR QAYQSTGHLA KLLPSGTVLA FQLLAPTMAK QGHCGDLDRM MTGGLVVLCA LSFFVVTFTD SFRDENGKVR
101: HGFATFKGLW PLMITFLDFF HATVSAVIFV AIALFDQNVA SCFYPIPSED TKQVLTTLPV AIGVIGSMLF VSFPTTHHGI GFPVSPQ

Best Arabidopsis Sequence Match ( AT4G28485.2 )
(BLAST)

001: MEETKQSLIA SLPSAPRKPK SKVERVVRKT FKGTAHLSNL LPTGSVMSFQ IMCPVLTHQG QCPTITSRWL TCFLVSLCAI SCFLFSFTDS IRDPNGKVRY
101: GLATWSGLLV MDGSITLTEE EKEKYKLKIL DFIHAIMSML VFFAVSMFDQ NVTRCLFPVP SEETKEILTS LPFVIGVICG AFFLAFPTRR HGIGSPLTKE

Arabidopsis Description

DMP7Protein DMP7 [Source:UniProtKB/Swiss-Prot;Acc:Q5XV67]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.