Factsheet for TraesCS7B01G498900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G119710.1	Barley	cytosol, plasma membrane, plastid	79.17	80.17
TraesCS7B01G498800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	78.75	80.08
TraesCS7B01G499800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	66.67	65.57
TraesCS7B01G499200.1	Wheat	vacuole	43.33	50.24
TraesCS7B01G497700.1	Wheat	cytosol, peroxisome, plasma membrane	44.17	49.77
TraesCS2B01G068400.1	Wheat	plastid	43.33	46.64
TraesCS6B01G427400.1	Wheat	plastid	42.5	44.74
TraesCS6B01G427300.1	Wheat	plastid	41.67	43.67
TraesCS6B01G427600.1	Wheat	plastid	40.83	43.17
TraesCS6B01G427800.1	Wheat	plastid	41.25	42.86
TraesCS6B01G427700.1	Wheat	plastid	43.33	42.8
TraesCS2B01G068300.1	Wheat	plastid	40.83	42.79
TraesCS2B01G068500.1	Wheat	plastid	40.42	42.36
TraesCS7B01G034700.1	Wheat	plastid	38.33	41.26
TraesCS7B01G399300.1	Wheat	cytosol, peroxisome, plasma membrane	41.25	40.41
TraesCS7B01G024300.1	Wheat	plastid	39.17	40.34
TraesCS7B01G024200.1	Wheat	cytosol, peroxisome, plastid, vacuole	40.83	39.68
TraesCS6B01G427500.1	Wheat	plasma membrane	40.83	38.74
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	36.25	38.33
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	32.92	36.57
AT5G27370.1	Thale cress	plasma membrane	28.33	35.6
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	25.0	32.09
TraesCS7B01G337100.1	Wheat	plasma membrane	24.58	30.57
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	27.08	30.52
TraesCS7B01G225000.1	Wheat	plastid	28.75	30.4
TraesCS4B01G141000.1	Wheat	plastid	25.83	29.95
TraesCS1B01G424300.1	Wheat	plasma membrane	26.67	29.09
TraesCS6B01G469800.1	Wheat	plastid	27.92	27.13
TraesCS3B01G440900.1	Wheat	plasma membrane	23.75	25.68
GSMUA_Achr5P26860_001	Banana	plasma membrane	36.25	19.68

Protein Annotations

EnsemblPlants:TraesCS7B01G498900.1	EnsemblPlantsGene:TraesCS7B01G498900	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:749492872..749493594

Molecular Weight (calculated)

26047.2 Da

IEP (calculated)

6.990

GRAVY (calculated)

0.032

Length

240 amino acids

Sequence
(BLAST)

001: METPAPPTPQ TAISMPGTSN VAVKQEAEGK TCVTQKVLSV SANLVQLLPT GSVMAYQMLA PSFSNQGNCY PSNWWITLGL VIALATSCVF FAFTDSVVHN
101: GKVYYGIATY EGLNVFNISS KDQETEFKSM KSELDKRHLK KQDFVHAFLT VVVFLTMAFS DVGLQNCFFP KAGTDAQQLL KNLPLGMAVF SSLVFTIFPS
201: KRNFIGCTDP NGDGHKDIMQ SQLESQSTST ATTPCTACGH

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.