Factsheet for TraesCS6B01G427500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G388300.1	Wheat	plasma membrane	81.82	82.8
HORVU6Hr1G090420.1	Barley	cytosol, plasma membrane, plastid, vacuole	80.63	81.93
TraesCS6B01G427400.1	Wheat	plastid	53.36	59.21
TraesCS2B01G068400.1	Wheat	plastid	51.78	58.74
TraesCS2B01G068300.1	Wheat	plastid	52.57	58.08
TraesCS2B01G068500.1	Wheat	plastid	52.17	57.64
TraesCS6B01G427800.1	Wheat	plastid	51.38	56.28
TraesCS6B01G427300.1	Wheat	plastid	50.59	55.9
TraesCS6B01G427600.1	Wheat	plastid	49.41	55.07
TraesCS6B01G427700.1	Wheat	plastid	52.57	54.73
TraesCS7B01G024200.1	Wheat	cytosol, peroxisome, plastid, vacuole	52.17	53.44
TraesCS7B01G024300.1	Wheat	plastid	49.01	53.22
TraesCS7B01G399300.1	Wheat	cytosol, peroxisome, plasma membrane	49.8	51.43
TraesCS7B01G034700.1	Wheat	plastid	45.06	51.12
TraesCS7B01G498800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	38.34	41.1
TraesCS7B01G499800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	39.53	40.98
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	36.76	40.97
TraesCS7B01G498900.1	Wheat	plastid	38.74	40.83
TraesCS7B01G497700.1	Wheat	cytosol, peroxisome, plasma membrane	33.99	40.38
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	33.6	39.35
TraesCS7B01G499200.1	Wheat	vacuole	31.62	38.65
TraesCS7B01G225000.1	Wheat	plastid	31.62	35.24
AT5G27370.1	Thale cress	plasma membrane	26.48	35.08
TraesCS1B01G424300.1	Wheat	plasma membrane	30.04	34.55
TraesCS7B01G337100.1	Wheat	plasma membrane	26.09	34.2
TraesCS4B01G141000.1	Wheat	plastid	27.27	33.33
TraesCS3B01G440900.1	Wheat	plasma membrane	27.27	31.08
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	22.92	31.02
TraesCS6B01G469800.1	Wheat	plastid	29.25	29.96
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	24.9	29.58
GSMUA_Achr5P26860_001	Banana	plasma membrane	36.76	21.04

Protein Annotations

EnsemblPlants:TraesCS6B01G427500.1	EnsemblPlantsGene:TraesCS6B01G427500	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:696029119..696029880

Molecular Weight (calculated)

27133.9 Da

IEP (calculated)

8.031

GRAVY (calculated)

0.071

Length

253 amino acids

Sequence
(BLAST)

001: MASSSSPPPP EPPLEPAGLP VPEPARVPAA ARPAPEPAPV PALEQAGLPE PAPAPPPAPA PPAPPAPKWV MPTIANLAQL LPTGTVLAYE ALSPTFTNHG
101: NCNIANKVLT GAMILVLAIM CVFFSFTDSI SRGGKLYYGV ATWDGFNVFN FSGEQERQEW TDRDYKKLRL RWLDIVQAIF TAVVFLTVAF SDVGLQNCYF
201: PKPGGNTQQV LKILPLGMAI VSSFVFTIFP TKRKGIGFND ITPRQTVNQS NAV

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.