Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G427500.1 | Wheat | plasma membrane | 81.93 | 80.63 |
| TraesCS6A01G388300.1 | Wheat | plasma membrane | 80.32 | 80.0 |
| HORVU6Hr1G090450.1 | Barley | plastid | 53.01 | 57.64 |
| HORVU6Hr1G090460.1 | Barley | plastid | 54.62 | 55.97 |
| HORVU7Hr1G110570.1 | Barley | cytosol, peroxisome, plastid | 51.81 | 52.02 |
| HORVU6Hr1G022610.1 | Barley | plasma membrane | 34.94 | 41.04 |
| HORVU7Hr1G119710.1 | Barley | cytosol, plasma membrane, plastid | 38.15 | 40.08 |
| HORVU5Hr1G118360.1 | Barley | cytosol, peroxisome, plasma membrane | 37.75 | 39.83 |
| HORVU7Hr1G119740.2 | Barley | plasma membrane | 32.93 | 39.42 |
| HORVU1Hr1G067430.1 | Barley | mitochondrion | 34.94 | 38.33 |
| AT5G27370.1 | Thale cress | plasma membrane | 29.32 | 38.22 |
| HORVU7Hr1G119790.1 | Barley | cytosol, vacuole | 38.96 | 36.74 |
| HORVU2Hr1G027720.1 | Barley | mitochondrion, plastid | 32.93 | 36.12 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 27.31 | 35.23 |
| HORVU7Hr1G077620.2 | Barley | plastid | 31.73 | 32.51 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 13.65 | 31.19 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 29.72 | 30.2 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 25.3 | 29.72 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 38.55 | 21.72 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G090420.1 | EnsemblPlantsGene:HORVU6Hr1G090420 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DMP |
| PANTHER:PTHR31621 | PFAM:PF05078 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B483D5C | UniProt:A0A287V539 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:572469851..572470900
Molecular Weight (calculated)
26880.5 Da
IEP (calculated)
5.242
GRAVY (calculated)
0.183
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSAPPP EPAPVPVPEP APALPVEAAP APAARPAPVP EREPAGLPVP APAAPPAPKW VMPSVANLAQ LLPTGTVLAY EALSPTFTNH GNCNIANKVL
101: TGVMILVLAI ICIFFSFTDS IVGDRDGKLY YGVATWNGFD VFNFSSQQER QLWTDDDFKE LRLRWLDIVQ AIFTAVVFLT VAFSDVGLQN CFFPKPGENT
201: QQVLKILPLG MAIVSSFIFS IFPTKRKGIG FNDIRPQRTV DQLNHSNAV
101: TGVMILVLAI ICIFFSFTDS IVGDRDGKLY YGVATWNGFD VFNFSSQQER QLWTDDDFKE LRLRWLDIVQ AIFTAVVFLT VAFSDVGLQN CFFPKPGENT
201: QQVLKILPLG MAIVSSFIFS IFPTKRKGIG FNDIRPQRTV DQLNHSNAV
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.