Factsheet for HORVU6Hr1G090450.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G427700.1	Wheat	plastid	91.7	86.42
TraesCS6D01G372500.1	Wheat	plastid	90.39	85.54
TraesCS6A01G388700.1	Wheat	plastid	89.08	84.3
HORVU6Hr1G090460.1	Barley	plastid	84.28	79.42
HORVU7Hr1G110570.1	Barley	cytosol, peroxisome, plastid	68.56	63.31
KXG19680	Sorghum	plastid	67.25	63.11
OQU76129	Sorghum	plastid	62.45	63.0
Zm00001d044777_P001	Maize	plastid	62.88	56.47
Os01t0389700-01	Rice	plastid	58.52	55.83
HORVU6Hr1G090420.1	Barley	cytosol, plasma membrane, plastid, vacuole	57.64	53.01
Os01t0389200-01	Rice	cytosol	59.39	51.52
HORVU6Hr1G022610.1	Barley	plasma membrane	43.23	46.7
HORVU1Hr1G067430.1	Barley	mitochondrion	44.98	45.37
HORVU7Hr1G119710.1	Barley	cytosol, plasma membrane, plastid	45.41	43.88
HORVU7Hr1G119740.2	Barley	plasma membrane	39.74	43.75
HORVU5Hr1G118360.1	Barley	cytosol, peroxisome, plasma membrane	44.54	43.22
HORVU7Hr1G119790.1	Barley	cytosol, vacuole	47.6	41.29
HORVU2Hr1G027720.1	Barley	mitochondrion, plastid	37.99	38.33
HORVU5Hr1G034760.1	Barley	plasma membrane	17.47	36.7
AT5G27370.1	Thale cress	plasma membrane	30.13	36.13
HORVU2Hr1G025080.1	Barley	cytosol, peroxisome, vacuole	31.88	34.43
HORVU7Hr1G100090.1	Barley	plasma membrane	28.82	34.2
HORVU7Hr1G077620.2	Barley	plastid	34.93	32.92
HORVU1Hr1G087380.1	Barley	mitochondrion	30.57	28.57
GSMUA_Achr5P26860_001	Banana	plasma membrane	43.67	22.62

Protein Annotations

EnsemblPlants:HORVU6Hr1G090450.1	EnsemblPlantsGene:HORVU6Hr1G090450	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DMP
PANTHER:PTHR31621	PANTHER:PTHR31621:SF24	PFAM:PF05078	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B483249
UniProt:A0A287V5J5	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:572492448..572494588

Molecular Weight (calculated)

24862.7 Da

IEP (calculated)

6.931

GRAVY (calculated)

0.108

Length

229 amino acids

Sequence
(BLAST)

001: MASSSSLSST AIQIHPVTDD DGGKITAAGT AGPAPTTGPA PATVMSSVSN LAQLLPTGTV LAYQALSPSF TNHGKCETSN QWLTGALVVI LALSCLFFAF
101: TDSVVGRRDA KLYYGFATPR GFNVFNFSSE EERQEWDDLD QFRRLRLRPL DFVHAFFAAV LFLTVALSDV GLQNCFFPDA GRNTEELLKN LPMGMAFLSS
201: FVFIIFPTKR KGIGFTDNAP RQKVVHPLN

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.