Factsheet for TraesCS6A01G388700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G372500.1	Wheat	plastid	94.63	94.63
TraesCS6B01G427700.1	Wheat	plastid	92.98	92.59
HORVU6Hr1G090450.1	Barley	plastid	84.3	89.08
TraesCS2A01G055400.1	Wheat	plastid	85.95	85.95
TraesCS2A01G055600.1	Wheat	plastid	80.58	85.15
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	63.64	80.63
TraesCS2A01G055300.1	Wheat	plastid	73.55	77.39
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	69.42	74.01
TraesCS6A01G388800.1	Wheat	plastid	70.25	73.59
TraesCS6A01G388200.1	Wheat	plastid	68.59	72.81
TraesCS6A01G388100.1	Wheat	plastid	68.18	72.05
OQU76129	Sorghum	plastid	61.16	65.2
TraesCS7A01G133600.1	Wheat	plastid	63.22	65.11
KXG19680	Sorghum	plastid	65.29	64.75
Zm00001d044777_P001	Maize	plastid	62.81	59.61
Os01t0389700-01	Rice	plastid	57.44	57.92
TraesCS6A01G388300.1	Wheat	plasma membrane	56.2	54.4
Os01t0389200-01	Rice	cytosol	57.44	52.65
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	44.63	50.7
TraesCS6A01G123100.1	Wheat	plastid	42.56	47.91
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	36.36	42.72
AT5G27370.1	Thale cress	plasma membrane	28.93	36.65
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	30.99	35.55
TraesCS7A01G324500.1	Wheat	plastid	33.06	35.24
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	28.1	35.23
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	29.75	34.78
TraesCS1A01G395800.1	Wheat	plasma membrane	30.99	33.94
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	34.71	33.2
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	27.27	30.28
TraesCS3A01G407300.1	Wheat	plasma membrane	27.27	29.73
GSMUA_Achr5P26860_001	Banana	plasma membrane	43.39	23.76

Protein Annotations

EnsemblPlants:TraesCS6A01G388700.1	EnsemblPlantsGene:TraesCS6A01G388700	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:604572857..604573675

Molecular Weight (calculated)

26272.3 Da

IEP (calculated)

5.638

GRAVY (calculated)

0.121

Length

242 amino acids

Sequence
(BLAST)

001: MAFSSSASPT VIQIHPVTNE DDGKITAAGA AAPTPTTGPA PATVMSSVSN LAQLLPTGTV LAYQALSPSF TNHGKCESSN QWLTGALVAV LTVSCLFFAF
101: TDSVVGRRDG KLYYGFATLR GFNVFNFSSE EERQEWNDLD QFRRLRLRPL DFVHAFFAAV VFLTVAFSDV GLQNCFFPDA SRNTEELLKN LPMGMAFLSS
201: FVFIIFPTKR KGIGFTDNAP PQKEIHTQSD LTTPLLAGVE VA

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.