Factsheet for TraesCS6A01G123100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	95.35	94.91
TraesCS6D01G113300.1	Wheat	plastid	94.88	94.88
HORVU6Hr1G022610.1	Barley	plasma membrane	90.7	91.98
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	73.49	74.18
KXG32269	Sorghum	cytosol, peroxisome, plasma membrane	75.81	70.56
Zm00001d008235_P001	Maize	golgi, peroxisome, plasma membrane	74.42	70.48
GSMUA_AchrUn_...	Banana	plastid	49.3	53.81
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	43.26	48.69
TraesCS7A01G133600.1	Wheat	plastid	50.23	45.96
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	46.98	44.49
TraesCS2A01G055600.1	Wheat	plastid	46.05	43.23
TraesCS6A01G388200.1	Wheat	plastid	45.58	42.98
TraesCS6A01G388700.1	Wheat	plastid	47.91	42.56
TraesCS2A01G055300.1	Wheat	plastid	45.12	42.17
TraesCS6A01G388100.1	Wheat	plastid	44.19	41.48
TraesCS6A01G388800.1	Wheat	plastid	44.19	41.13
TraesCS2A01G055400.1	Wheat	plastid	46.05	40.91
AT5G27370.1	Thale cress	plasma membrane	35.35	39.79
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	36.74	38.35
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	34.42	38.34
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	36.28	37.68
TraesCS7A01G324500.1	Wheat	plastid	38.14	36.12
TraesCS6A01G388300.1	Wheat	plasma membrane	41.86	36.0
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	40.93	34.78
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	33.02	33.65
TraesCS1A01G395800.1	Wheat	plasma membrane	33.49	32.58
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	31.16	30.73
TraesCS3A01G407300.1	Wheat	plasma membrane	30.7	29.73

Protein Annotations

EnsemblPlants:TraesCS6A01G123100.1	EnsemblPlantsGene:TraesCS6A01G123100	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF2	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6A:+:96772296..96772943

Molecular Weight (calculated)

22788.7 Da

IEP (calculated)

7.897

GRAVY (calculated)

0.322

Length

215 amino acids

Sequence
(BLAST)

001: MDPVSNAVHI QMPAPAQQSS PRQAPPPTGV LPPADKTLSS ASDLLKLLPT GTVLAFQALA PSFSNNHGVC HAANRCLVLA LIGGCAASCV LLSFTDSLVG
101: RDGRLYYGAA TLGGFYPFNF TGTRGERDAV FKDLSRFRVT PMDLVHAVVS ALVFLAVAFA DAGIQGCLFP DARTDTRELL VNLPLAAGFL ASMVFMIFPT
201: TRKSIGYTDM MPHSQ

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.