Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.28 | 93.58 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.94 | 85.51 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 72.02 | 75.48 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 69.72 | 73.08 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 60.55 | 62.56 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 57.8 | 60.58 |
| TraesCS1A01G395800.1 | Wheat | plasma membrane | 58.72 | 57.92 |
| PGSC0003DMT400081227 | Potato | plasma membrane | 49.54 | 51.67 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 49.54 | 51.18 |
| KRH21356 | Soybean | cytosol, peroxisome, plasma membrane | 49.54 | 51.18 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 48.62 | 50.72 |
| KRH20387 | Soybean | plasma membrane | 48.62 | 48.85 |
| KRH55890 | Soybean | plasma membrane | 44.5 | 46.86 |
| AT5G46090.1 | Thale cress | plasma membrane | 45.87 | 46.73 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 45.87 | 46.73 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 45.87 | 46.73 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 45.87 | 46.73 |
| Bra021010.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 45.41 | 46.26 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 50.92 | 45.31 |
| AT4G18425.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 44.04 | 45.07 |
| VIT_12s0028g03070.t01 | Wine grape | plasma membrane | 44.04 | 44.86 |
| PGSC0003DMT400035732 | Potato | plasma membrane | 45.87 | 44.84 |
| Solyc10g008970.1.1 | Tomato | plasma membrane | 44.95 | 44.75 |
| CDY33452 | Canola | plasma membrane | 43.58 | 43.78 |
| CDY60883 | Canola | cytosol | 44.95 | 43.75 |
| Bra025039.1-P | Field mustard | plasma membrane | 43.12 | 43.32 |
| Bra013307.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.5 | 43.3 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 44.5 | 43.3 |
| Solyc12g005490.1.1 | Tomato | plasma membrane | 44.04 | 42.67 |
| CDY34571 | Canola | plasma membrane | 42.2 | 42.4 |
| CDX77630 | Canola | plasma membrane | 41.28 | 41.47 |
| TraesCS4A01G176900.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 38.53 | 40.58 |
| KRH50120 | Soybean | peroxisome | 38.53 | 40.38 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 44.5 | 40.25 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 44.5 | 40.25 |
| Bra025040.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.5 | 40.25 |
| TraesCS7A01G324500.1 | Wheat | plastid | 36.7 | 35.24 |
| TraesCS2A01G055500.1 | Wheat | endoplasmic reticulum, plasma membrane | 28.9 | 32.98 |
| TraesCS2A01G153900.1 | Wheat | cytosol, peroxisome, vacuole | 31.65 | 32.39 |
| TraesCS2A01G141700.1 | Wheat | cytosol, peroxisome, vacuole | 30.73 | 31.75 |
| TraesCS6A01G123100.1 | Wheat | plastid | 30.73 | 31.16 |
| TraesCS7A01G438100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 27.06 | 30.57 |
| CDY38243 | Canola | cytosol | 17.89 | 28.68 |
| TraesCS2A01G055600.1 | Wheat | plastid | 29.82 | 28.38 |
| TraesCS2A01G055300.1 | Wheat | plastid | 29.36 | 27.83 |
| TraesCS3A01G407300.1 | Wheat | plasma membrane | 27.98 | 27.48 |
| TraesCS6A01G388700.1 | Wheat | plastid | 30.28 | 27.27 |
| TraesCS6A01G388200.1 | Wheat | plastid | 28.44 | 27.19 |
| TraesCS7A01G563500.1 | Wheat | cytosol, plasma membrane, vacuole | 25.69 | 27.18 |
| TraesCS2A01G055400.1 | Wheat | plastid | 29.82 | 26.86 |
| TraesCS6A01G388100.1 | Wheat | plastid | 27.06 | 25.76 |
| TraesCS7A01G133600.1 | Wheat | plastid | 27.52 | 25.53 |
| TraesCS6A01G388600.1 | Wheat | cytosol, plasma membrane, plastid | 25.69 | 24.67 |
| TraesCS6A01G388300.1 | Wheat | plasma membrane | 27.98 | 24.4 |
| TraesCS6A01G388800.1 | Wheat | plastid | 25.69 | 24.24 |
| TraesCS5A01G470700.1 | Wheat | cytosol, golgi, peroxisome | 25.23 | 21.74 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G245800.1 | EnsemblPlantsGene:TraesCS3A01G245800 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF0 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:461153262..461153918
Molecular Weight (calculated)
23804.1 Da
IEP (calculated)
6.774
GRAVY (calculated)
0.269
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MTATQPDMEL QKDQRHPLLS NRTDGTDNMS PVQKAIRQAY QSTGHLAKLL PSGTVLAFQL LAPTMAKQGH CGDLDRMMMG GLVVLCALSC FVVTFTDSFR
101: DENGKVQYGF ATFKGLWVID GGVTLDPHAA VEYKMTFLDF FHAAVSAVIF VAIALFDQNV ASCFYPIPSE DTKQVLTTLP VAIGVIGSML FVSFPTTRHG
201: FGFPVSPQYL GLQKICLL
101: DENGKVQYGF ATFKGLWVID GGVTLDPHAA VEYKMTFLDF FHAAVSAVIF VAIALFDQNV ASCFYPIPSE DTKQVLTTLP VAIGVIGSML FVSFPTTRHG
201: FGFPVSPQYL GLQKICLL
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.