Factsheet for Bra025039.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33452	Canola	plasma membrane	99.54	99.54
CDX77630	Canola	plasma membrane	98.16	98.16
CDY34571	Canola	plasma membrane	98.16	98.16
AT5G46090.1	Thale cress	plasma membrane	70.51	71.5
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.44	66.36
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.43	64.32
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.44	63.39
PGSC0003DMT400081227	Potato	plasma membrane	59.91	62.2
Solyc02g077640.1.1	Tomato	plasma membrane	57.14	59.33
VIT_13s0106g00720.t01	Wine grape	plasma membrane	55.3	56.87
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	54.84	56.4
GSMUA_Achr4P10580_001	Banana	cytosol	53.0	55.29
GSMUA_Achr4P02720_001	Banana	plasma membrane	53.46	54.98
KRH20387	Soybean	plasma membrane	53.0	53.0
VIT_10s0003g00320.t01	Wine grape	plasma membrane	57.6	51.02
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	47.47	49.52
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	43.78	47.5
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	44.7	46.63
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	40.09	46.52
Bra011032.1-P	Field mustard	plasma membrane	42.86	46.5
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	44.7	45.33
HORVU1Hr1G087380.1	Barley	mitochondrion	51.15	45.31
Os05t0562800-02	Rice	plastid	48.85	44.54
KRH50120	Soybean	peroxisome	41.47	43.27
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	43.32	43.12
Bra023874.1-P	Field mustard	plasma membrane	35.02	41.08
Os06t0352200-01	Rice	plasma membrane, plastid	46.08	39.53
Bra031289.1-P	Field mustard	plasma membrane	33.64	39.46
Bra021460.1-P	Field mustard	plasma membrane, plastid	39.63	38.91
Bra010492.1-P	Field mustard	plastid	38.71	38.36
Bra013790.1-P	Field mustard	plasma membrane, plastid	35.02	34.55
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	30.41	32.67
Bra006030.1-P	Field mustard	plasma membrane	27.19	31.22
Bra031287.1-P	Field mustard	plasma membrane	28.57	30.39
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	21.66	29.38
Bra025657.1-P	Field mustard	plastid	30.88	27.46

Protein Annotations

EnsemblPlants:Bra025039.1	EnsemblPlants:Bra025039.1-P	EnsemblPlantsGene:Bra025039	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	TMHMM:TMhelix	UniParc:UPI000253FBE4
UniProt:M4E8D3	MapMan:35.1	:	:	:	:

Description

AT5G46090 (E=6e-087) | unknown protein

Coordinates

chrA06:-:24836179..24836832

Molecular Weight (calculated)

23803.8 Da

IEP (calculated)

6.612

GRAVY (calculated)

0.236

Length

217 amino acids

Sequence
(BLAST)

001: METKVDEEAG VNGAGGAIKE EKAPLLKAQE FPEVERNNWI HKAIGQTFQT TAHLANHLPT GTALAYQVLS PVLTNGGRCD FASRYMTEML VSICAFTCFI
101: LSFTDSYRDL NGTVCYGFAT TNGLWIIDGK AVLPKERSKS YRLQFIDFAH AFMTLLVFGA VVMFDHNVVN CFFPKPSAEV AELLTALPVA IGVFCSMMFA
201: TFPTTRHGIG FPLSAHC

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.