Factsheet for Solyc02g077640.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081227	Potato	plasma membrane	93.78	93.78
VIT_13s0106g00720.t01	Wine grape	plasma membrane	71.29	70.62
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	67.94	67.3
Solyc10g008970.1.1	Tomato	plasma membrane	69.86	66.67
KRH20387	Soybean	plasma membrane	66.03	63.59
AT5G46090.1	Thale cress	plasma membrane	63.16	61.68
CDX76524	Canola	cytosol, peroxisome, plasma membrane	62.2	60.75
CDX76523	Canola	cytosol, peroxisome, plasma membrane	62.2	60.75
CDY55785	Canola	cytosol, peroxisome, plasma membrane	62.2	60.75
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.72	60.28
GSMUA_Achr4P10580_001	Banana	cytosol	59.81	60.1
GSMUA_Achr4P02720_001	Banana	plasma membrane	59.81	59.24
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	60.29	59.15
CDX78854	Canola	cytosol, peroxisome, plasma membrane	62.2	58.04
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.2	58.04
VIT_10s0003g00320.t01	Wine grape	plasma membrane	67.94	57.96
CDY33452	Canola	plasma membrane	59.81	57.6
CDY60883	Canola	cytosol	61.72	57.59
CDY34571	Canola	plasma membrane	59.33	57.14
Bra025039.1-P	Field mustard	plasma membrane	59.33	57.14
CDX77630	Canola	plasma membrane	58.37	56.22
CDY70034	Canola	cytosol, peroxisome, plasma membrane	63.64	55.19
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.64	55.19
CDX77629	Canola	cytosol, peroxisome, plasma membrane	63.64	55.19
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	54.55	54.81
KRH50120	Soybean	peroxisome	54.07	54.33
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	46.89	52.41
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	51.67	51.92
Solyc12g005490.1.1	Tomato	plasma membrane	55.02	51.11
Os05t0562800-02	Rice	plastid	57.89	50.84
Solyc01g103580.2.1	Tomato	plasma membrane	52.15	49.1
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	50.24	49.07
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	50.72	48.62
HORVU1Hr1G087380.1	Barley	mitochondrion	56.94	48.57
CDY38243	Canola	cytosol	28.23	43.38
Os06t0352200-01	Rice	plasma membrane, plastid	49.76	41.11
Solyc01g080490.2.1	Tomato	extracellular	33.01	39.66
Solyc05g007920.2.1	Tomato	cytosol	36.84	34.22
Solyc10g050200.1.1	Tomato	plasma membrane	31.1	30.81

Protein Annotations

MapMan:35.1	InterPro:DMP	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005783	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0010256
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:K4B8Y9	PFAM:PF05078	PANTHER:PTHR31621
PANTHER:PTHR31621:SF0	EnsemblPlantsGene:Solyc02g077640.1	EnsemblPlants:Solyc02g077640.1.1	TMHMM:TMhelix	UniParc:UPI0002767D0D	SEG:seg

Description

No Description!

Coordinates

chr2:+:42537780..42538409

Molecular Weight (calculated)

22913.0 Da

IEP (calculated)

5.173

GRAVY (calculated)

0.405

Length

209 amino acids

Sequence
(BLAST)

001: MEIKVDNQIP RNLDDEKVPL LESSELPEVE KNLIQQAISH TFKSTAHLAN LLPTGSVLAF QFLSPIFTNQ GQCDVVGRSL TAGLVALCGL SCFLLNFTDS
101: FKDQKGNICY GFATTRGLWI IDGSATPPLE VAAKYKLKFI DFMHAIMSIL VFAAVALFDQ NVVSCFYPTP SYETQELLTA LPVAIGVICS MLFVVFPTQR
201: HGIGFPLTC

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.