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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55785 Canola cytosol, peroxisome, plasma membrane 87.79 87.38
CDX76523 Canola cytosol, peroxisome, plasma membrane 87.79 87.38
CDX76524 Canola cytosol, peroxisome, plasma membrane 87.32 86.92
Bra021010.1-P Field mustard cytosol, peroxisome, plasma membrane 85.92 85.51
CDY60883 Canola cytosol 87.79 83.48
CDX78854 Canola cytosol, peroxisome, plasma membrane 87.79 83.48
Bra013307.1-P Field mustard cytosol, peroxisome, plasma membrane 87.32 83.04
AT5G46090.1 Thale cress plasma membrane 74.18 73.83
VIT_13s0106g00720.t01 Wine grape plasma membrane 61.5 62.09
PGSC0003DMT400081227 Potato plasma membrane 60.56 61.72
Solyc02g077640.1.1 Tomato plasma membrane 59.15 60.29
KRH21356 Soybean cytosol, peroxisome, plasma membrane 59.15 59.72
KRH20387 Soybean plasma membrane 59.62 58.53
GSMUA_Achr4P10580_001 Banana cytosol 56.81 58.17
GSMUA_Achr4P02720_001 Banana plasma membrane 54.46 54.98
VIT_10s0003g00320.t01 Wine grape plasma membrane 59.62 51.84
KRH50120 Soybean peroxisome 48.36 49.52
KXG33079 Sorghum cytosol, endoplasmic reticulum, plasma membrane 47.42 48.56
TraesCS3B01G273700.1 Wheat cytosol, peroxisome, plasma membrane 41.31 47.06
Zm00001d011558_P001 Maize cytosol, endoplasmic reticulum, peroxisome 45.54 46.63
TraesCS3D01G245600.1 Wheat cytosol, peroxisome, plasma membrane 46.48 46.26
AT4G28485.2 Thale cress plasma membrane, plastid 42.72 45.5
Os05t0562800-02 Rice plastid 50.23 44.96
HORVU1Hr1G087380.1 Barley mitochondrion 51.64 44.9
TraesCS3A01G245800.1 Wheat cytosol, peroxisome, plasma membrane 45.07 44.04
AT3G21550.1 Thale cress plasma membrane 35.21 40.76
AT5G27370.1 Thale cress plasma membrane 35.68 39.79
AT4G24310.1 Thale cress plastid 39.44 39.44
AT3G02430.1 Thale cress plastid 39.44 38.36
Os06t0352200-01 Rice plasma membrane, plastid 44.6 37.55
AT3G21520.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 33.33 34.3
AT1G09157.1 Thale cress plastid 33.8 29.63
AT5G39650.1 Thale cress plastid 33.8 29.51
Protein Annotations
MapMan:35.1EntrezGene:827573UniProt:A0A178UUN1ProteinID:AEE84044.1EMBL:AK228802EMBL:AL161548
ArrayExpress:AT4G18425EnsemblPlantsGene:AT4G18425RefSeq:AT4G18425TAIR:AT4G18425RefSeq:AT4G18425-TAIR-GEnsemblPlants:AT4G18425.1
TAIR:AT4G18425.1EMBL:AY088669InterPro:DMPGO:GO:0003674GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0005783GO:GO:0007275
GO:GO:0008150GO:GO:0009705GO:GO:0009838GO:GO:0009987GO:GO:0010256GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0090693RefSeq:NP_567556.1ProteinID:OAO97325.1PFAM:PF05078
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR31621
PANTHER:PTHR31621:SF0UniProt:Q8L928TMHMM:TMhelixUniParc:UPI00000A7641::
Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
Coordinates
chr4:-:10181190..10182264
Molecular Weight (calculated)
23469.4 Da
IEP (calculated)
6.099
GRAVY (calculated)
0.245
Length
213 amino acids
Sequence
(BLAST)
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.