Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P10580_001 | Banana | cytosol | 84.83 | 86.06 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.82 | 65.24 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 62.56 | 63.46 |
| GSMUA_Achr8P19660_001 | Banana | cytosol | 59.24 | 61.27 |
| PGSC0003DMT400081227 | Potato | plasma membrane | 60.66 | 61.24 |
| TraesCS3A01G245800.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.56 | 60.55 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.14 | 60.28 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 60.19 | 60.19 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 59.24 | 60.1 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 59.24 | 59.81 |
| KRH20387 | Soybean | plasma membrane | 58.77 | 57.14 |
| VIT_12s0028g03070.t01 | Wine grape | plasma membrane | 57.82 | 57.01 |
| KRH21356 | Soybean | cytosol, peroxisome, plasma membrane | 56.87 | 56.87 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, vacuole | 56.4 | 56.4 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 55.92 | 55.14 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 55.92 | 55.14 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 55.92 | 55.14 |
| Bra021010.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 55.92 | 55.14 |
| AT5G46090.1 | Thale cress | plasma membrane | 55.45 | 54.67 |
| KRH55890 | Soybean | plasma membrane | 53.55 | 54.59 |
| AT4G18425.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 54.98 | 54.46 |
| CDY33452 | Canola | plasma membrane | 55.45 | 53.92 |
| Bra025039.1-P | Field mustard | plasma membrane | 54.98 | 53.46 |
| CDY34571 | Canola | plasma membrane | 54.5 | 53.0 |
| Solyc10g008970.1.1 | Tomato | plasma membrane | 54.98 | 52.97 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 60.66 | 52.24 |
| CDX77630 | Canola | plasma membrane | 53.55 | 52.07 |
| Bra013307.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 54.98 | 51.79 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 54.98 | 51.79 |
| CDY60883 | Canola | cytosol | 54.5 | 51.34 |
| GSMUA_Achr10P... | Banana | cytosol | 55.45 | 50.21 |
| PGSC0003DMT400035732 | Potato | plasma membrane | 52.61 | 49.78 |
| KRH50120 | Soybean | peroxisome | 48.82 | 49.52 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 56.4 | 49.38 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 55.92 | 48.96 |
| Bra025040.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 55.92 | 48.96 |
| Solyc12g005490.1.1 | Tomato | plasma membrane | 51.66 | 48.44 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 46.92 | 45.41 |
| CDY38243 | Canola | cytosol | 24.64 | 38.24 |
| GSMUA_AchrUn_... | Banana | plastid | 35.55 | 38.07 |
| GSMUA_Achr10P... | Banana | plastid | 36.49 | 36.84 |
| GSMUA_Achr6P08370_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 33.18 | 36.08 |
| GSMUA_Achr11P... | Banana | plasma membrane | 32.23 | 34.52 |
| GSMUA_Achr8P32620_001 | Banana | plasma membrane | 31.28 | 30.56 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 34.12 | 16.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P02720_001 | EnsemblPlants:GSMUA_Achr4T02720_001 | EnsemblPlantsGene:GSMUA_Achr4G02720_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF0 | PFAM:PF05078 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000295A402 | UniProt:M0SKI9 | MapMan:35.1 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G02720_001]
Coordinates
chr4:-:2295887..2296762
Molecular Weight (calculated)
22869.8 Da
IEP (calculated)
7.392
GRAVY (calculated)
0.394
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKITDVEA QQQQQQQKQP LLAPDSSGDD QVTSVQRAIS QTFRSTAHLA KLLPTGTVLA FQLLSPIFTD GGHCMAANRL MTACLAALCA LSCFVLSFTD
101: SFRDGNSTVR YGLATFKGLW VIDGTAPLPP TIAIGYRIKF IDFVHAFMSF LVFAAVALFD QNVASCFYPI PSEETKQVLT CLPVAIGVIC SMLFVTFPTT
201: RHGIGFPLSP H
101: SFRDGNSTVR YGLATFKGLW VIDGTAPLPP TIAIGYRIKF IDFVHAFMSF LVFAAVALFD QNVASCFYPI PSEETKQVLT CLPVAIGVIC SMLFVTFPTT
201: RHGIGFPLSP H
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.