Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, vacuole | 62.75 | 60.66 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 61.27 | 59.24 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 59.31 | 58.17 |
| GSMUA_Achr10P... | Banana | cytosol | 63.73 | 55.79 |
| TraesCS1B01G424300.1 | Wheat | plasma membrane | 57.35 | 53.18 |
| Os05t0562800-02 | Rice | plastid | 61.27 | 52.52 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 56.37 | 52.27 |
| TraesCS1A01G395800.1 | Wheat | plasma membrane | 56.37 | 52.04 |
| EES19945 | Sorghum | cytosol | 59.31 | 50.63 |
| Zm00001d009557_P001 | Maize | cytosol | 57.84 | 50.0 |
| TraesCS4B01G141000.1 | Wheat | plastid | 48.04 | 47.34 |
| TraesCS4A01G176900.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 47.55 | 46.86 |
| EES05060 | Sorghum | cytosol, plasma membrane, vacuole | 47.55 | 46.63 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 55.39 | 46.12 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 48.53 | 45.41 |
| Zm00001d016492_P001 | Maize | cytosol, plasma membrane, vacuole | 46.57 | 45.02 |
| TraesCS4D01G135800.1 | Wheat | plastid | 48.04 | 44.75 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 51.47 | 41.5 |
| Zm00001d046149_P001 | Maize | plastid | 50.49 | 40.55 |
| GSMUA_Achr6P08370_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 36.27 | 38.14 |
| GSMUA_AchrUn_... | Banana | plastid | 36.27 | 37.56 |
| EER88463 | Sorghum | plastid | 50.98 | 37.41 |
| GSMUA_Achr11P... | Banana | plasma membrane | 35.78 | 37.06 |
| GSMUA_Achr10P... | Banana | plastid | 34.8 | 33.97 |
| GSMUA_Achr8P32620_001 | Banana | plasma membrane | 33.82 | 31.94 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 34.8 | 16.06 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P19660_001 | EnsemblPlants:GSMUA_Achr8T19660_001 | EnsemblPlantsGene:GSMUA_Achr8G19660_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PFAM:PF05078 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00029527B3 |
| UniProt:M0TRW9 | MapMan:35.1 | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G19660_001]
Coordinates
chr8:+:24866132..24866746
Molecular Weight (calculated)
21971.5 Da
IEP (calculated)
5.612
GRAVY (calculated)
0.195
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MATHAAEDDQ EKQPLIKYEE SSVDDPPNLI QKAYRSTADL ANHLPTGTAL AFQVLSPVLT NQGRCTDANR VMASCLLALC ALSCWLLSFT DSFRDEATGR
101: VRYGLATLKG LWVIDGLKPL PPELAAGYRL RLVDLLHAFT SLLVFAAVAL LDKNVASCFY PTPSEDTRQV LSALPVGIGV IGSTLLVAFP TSRHGIGFPL
201: SPDT
101: VRYGLATLKG LWVIDGLKPL PPELAAGYRL RLVDLLHAFT SLLVFAAVAL LDKNVASCFY PTPSEDTRQV LSALPVGIGV IGSTLLVAFP TSRHGIGFPL
201: SPDT
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.