Factsheet for Os06t0352200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
mitochondrion 1
plasma membrane 3
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046149_P001	Maize	plastid	74.31	74.02
EER88463	Sorghum	plastid	75.49	68.7
GSMUA_Achr8P19660_001	Banana	cytosol	41.5	51.47
Solyc02g077640.1.1	Tomato	plasma membrane	41.11	49.76
PGSC0003DMT400081227	Potato	plasma membrane	41.11	49.76
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	40.32	48.34
Os05t0562800-02	Rice	plastid	44.27	47.06
VIT_13s0106g00720.t01	Wine grape	plasma membrane	38.74	46.45
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	38.74	46.45
CDY33452	Canola	plasma membrane	39.53	46.08
Bra025039.1-P	Field mustard	plasma membrane	39.53	46.08
KRH55890	Soybean	plasma membrane	37.55	45.89
KRH20387	Soybean	plasma membrane	39.13	45.62
CDX76524	Canola	cytosol, peroxisome, plasma membrane	38.34	45.33
CDX76523	Canola	cytosol, peroxisome, plasma membrane	38.34	45.33
CDY55785	Canola	cytosol, peroxisome, plasma membrane	38.34	45.33
CDY34571	Canola	plasma membrane	38.74	45.16
AT5G46090.1	Thale cress	plasma membrane	37.94	44.86
VIT_12s0028g03070.t01	Wine grape	plasma membrane	37.94	44.86
CDX77630	Canola	plasma membrane	38.34	44.7
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	37.55	44.6
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.55	44.39
CDX78854	Canola	cytosol, peroxisome, plasma membrane	38.74	43.75
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.74	43.75
CDY60883	Canola	cytosol	38.34	43.3
PGSC0003DMT400035732	Potato	plasma membrane	37.94	43.05
Solyc12g005490.1.1	Tomato	plasma membrane	37.55	42.22
GSMUA_Achr10P...	Banana	cytosol	37.94	41.2
KRH50120	Soybean	peroxisome	33.6	40.87
CDX77629	Canola	cytosol, peroxisome, plasma membrane	38.34	40.25
Solyc10g008970.1.1	Tomato	plasma membrane	34.78	40.18
VIT_10s0003g00320.t01	Wine grape	plasma membrane	38.74	40.0
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.94	39.83
CDY70034	Canola	cytosol, peroxisome, plasma membrane	37.94	39.83
Os08t0106501-01	Rice	plastid	34.39	38.84
Os07t0645300-01	Rice	plasma membrane, vacuole	28.85	38.83
Os03t0370400-01	Rice	plastid	28.85	37.82
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	27.67	31.11
CDY38243	Canola	cytosol	16.6	30.88
Os01t0882400-01	Rice	cytosol, peroxisome	28.46	30.13
Os01t0389700-01	Rice	plastid	27.67	29.17
Os07t0407900-01	Rice	cytosol, peroxisome, plasma membrane	30.04	29.01
Os01t0368700-01	Rice	cytosol, plasma membrane	24.51	27.56
Os01t0389200-01	Rice	cytosol	26.88	25.76
Os01t0368500-00	Rice	golgi, nucleus, plasma membrane	26.48	21.07

Protein Annotations

MapMan:35.1	EntrezGene:4340983	EMBL:AK071746	ProteinID:BAD36000.1	ProteinID:BAF19502.1	ProteinID:BAS97673.1
InterPro:DMP	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005783	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0010256	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	EnsemblPlantsGene:Os06g0352200	EnsemblPlants:Os06t0352200-01	PFAM:PF05078	PANTHER:PTHR31621
PANTHER:PTHR31621:SF3	UniProt:Q69SN5	TMHMM:TMhelix	UniParc:UPI000040394A	RefSeq:XP_015642079.1	SEG:seg

Description

Protein of unknown function DUF679 family protein. (Os06t0352200-01)

Coordinates

chr6:-:14347071..14348226

Molecular Weight (calculated)

26719.0 Da

IEP (calculated)

6.385

GRAVY (calculated)

0.278

Length

253 amino acids

Sequence
(BLAST)

001: MASNKQIDLE SQKPATSSPA ASVSSAAAAT APPASSSAVP VSVGITNRHN VQPETEPLLL LAGGDGDGGS DDETTRLERT ITRAFRSTAE LAKHLPTGAV
101: LVFEVLSPVF TNGGKCQDVN RVMTAWLVGL CAAACFFLCF TDSFHDGKGT VRYVVATRAG LWVIDGTAPP PPDVAATYRL RFIDFFHAVL SLIVFLSVAM
201: FDHNVGACFY PVMSYDTRQV LTDVPLAGGL VGTMLFATFP STRHGIGFPV HVA

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.