Factsheet for Os07t0645300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 4
golgi 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	vacuole
YLoc:	plasma membrane

vacuole: 18557835
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G034760.1	Barley	plasma membrane	45.21	77.98
Zm00001d007047_P001	Maize	golgi, plasma membrane, vacuole	78.72	77.89
TraesCS2D01G145200.1	Wheat	cytosol, peroxisome, vacuole	80.32	71.56
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	79.79	71.09
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	79.26	69.95
HORVU2Hr1G025080.1	Barley	cytosol, peroxisome, vacuole	78.72	69.81
EER97642	Sorghum	peroxisome	78.19	66.52
Os03t0370400-01	Rice	plastid	48.94	47.67
CDY19287	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.68	41.58
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.15	41.09
CDY37281	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.15	41.09
CDY38622	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.15	40.69
Bra031287.1-P	Field mustard	plasma membrane	43.62	40.2
AT3G21520.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	44.15	40.1
CDY44329	Canola	endoplasmic reticulum, extracellular, vacuole	7.98	33.33
Os05t0562800-02	Rice	plastid	41.49	32.77
Os08t0106501-01	Rice	plastid	38.83	32.59
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	38.3	32.0
Os01t0368700-01	Rice	cytosol, plasma membrane	35.11	29.33
Os06t0352200-01	Rice	plasma membrane, plastid	38.83	28.85
Os01t0389700-01	Rice	plastid	36.7	28.75
Os07t0407900-01	Rice	cytosol, peroxisome, plasma membrane	37.77	27.1
Os01t0882400-01	Rice	cytosol, peroxisome	31.91	25.1
Os01t0389200-01	Rice	cytosol	31.38	22.35
Os01t0368500-00	Rice	golgi, nucleus, plasma membrane	32.45	19.18

Protein Annotations

MapMan:35.1	ProteinID:BAC84339.1	ProteinID:BAF22368.1	ProteinID:BAT02898.1	InterPro:DMP	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0007275
GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0061025	GO:GO:0090148	GO:GO:0090158	GO:GO:0090693	EnsemblPlantsGene:Os07g0645300
EnsemblPlants:Os07t0645300-01	PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF1	UniProt:Q7EYL4	TMHMM:TMhelix
UniParc:UPI00001BF666	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF679 family protein. (Os07t0645300-01)

Coordinates

chr7:+:26911529..26912445

Molecular Weight (calculated)

19677.0 Da

IEP (calculated)

8.616

GRAVY (calculated)

0.614

Length

188 amino acids

Sequence
(BLAST)

001: MADTTFKSIG DVLKLLPTAT VIVYEVLTPI VTNTGDCHVA NKVVTPVILV LCAFFCAFSQ FTDSYVGADG KVRYGLVTAR GLLPFSGGGG ADGGDAAGRD
101: FSKYRLRFGD FVHAFFSVAV FAAVALLADA NTVSCFYPSL KDQQKKVVMA LPVVVGALAS VVFVVFPSTR HGIGYPPAKP ATASLASL

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.