Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 6
- cytosol 1
- plasma membrane 1
- extracellular 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 50.83 | 68.16 |
| TraesCS2A01G055500.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.75 | 67.54 |
| KXG19680 | Sorghum | plastid | 67.92 | 66.8 |
| OQU76129 | Sorghum | plastid | 62.08 | 65.64 |
| TraesCS6A01G388600.1 | Wheat | cytosol, plasma membrane, plastid | 59.17 | 62.56 |
| TraesCS6B01G427600.1 | Wheat | plastid | 58.33 | 61.67 |
| TraesCS2B01G068400.1 | Wheat | plastid | 57.08 | 61.44 |
| TraesCS6B01G427400.1 | Wheat | plastid | 58.33 | 61.4 |
| TraesCS7A01G133600.1 | Wheat | plastid | 59.58 | 60.85 |
| TraesCS6D01G372600.1 | Wheat | plastid | 58.33 | 60.61 |
| TraesCS6D01G372400.1 | Wheat | plastid | 57.5 | 60.53 |
| TraesCS6A01G388200.1 | Wheat | plastid | 57.08 | 60.09 |
| TraesCS6D01G372300.1 | Wheat | plastid | 58.75 | 60.0 |
| TraesCS2B01G068300.1 | Wheat | plastid | 57.08 | 59.83 |
| TraesCS6B01G427800.1 | Wheat | plastid | 57.5 | 59.74 |
| TraesCS7B01G024300.1 | Wheat | plastid | 57.92 | 59.66 |
| Zm00001d044777_P001 | Maize | plastid | 63.33 | 59.61 |
| TraesCS2D01G054400.1 | Wheat | plastid | 56.67 | 59.39 |
| TraesCS2A01G055600.1 | Wheat | plastid | 56.67 | 59.39 |
| TraesCS6A01G388800.1 | Wheat | plastid | 57.08 | 59.31 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.42 | 59.18 |
| TraesCS6D01G372200.1 | Wheat | plastid | 56.25 | 58.95 |
| TraesCS7D01G479500.1 | Wheat | plastid | 60.42 | 58.94 |
| TraesCS7B01G024200.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 60.42 | 58.7 |
| TraesCS2A01G055300.1 | Wheat | plastid | 56.25 | 58.7 |
| TraesCS6A01G388100.1 | Wheat | plastid | 55.83 | 58.52 |
| TraesCS6B01G427300.1 | Wheat | plastid | 55.83 | 58.52 |
| HORVU6Hr1G090450.1 | Barley | plastid | 55.83 | 58.52 |
| TraesCS2B01G068500.1 | Wheat | plastid | 55.42 | 58.08 |
| HORVU7Hr1G110570.1 | Barley | cytosol, peroxisome, plastid | 60.0 | 58.06 |
| HORVU6Hr1G090460.1 | Barley | plastid | 58.75 | 58.02 |
| TraesCS7B01G399300.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.17 | 57.96 |
| TraesCS6D01G372500.1 | Wheat | plastid | 58.33 | 57.85 |
| TraesCS6A01G388700.1 | Wheat | plastid | 57.92 | 57.44 |
| TraesCS6B01G427700.1 | Wheat | plastid | 57.92 | 57.2 |
| TraesCS7B01G034700.1 | Wheat | plastid | 52.92 | 56.95 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 58.33 | 56.68 |
| TraesCS2D01G054300.1 | Wheat | plastid | 57.08 | 56.61 |
| TraesCS2A01G055400.1 | Wheat | plastid | 57.08 | 56.61 |
| Os01t0389200-01 | Rice | cytosol | 60.0 | 54.55 |
| Os01t0388700-01 | Rice | cytosol, peroxisome, plasma membrane | 41.67 | 44.44 |
| Os07t0407900-01 | Rice | cytosol, peroxisome, plasma membrane | 44.17 | 40.46 |
| AT5G27370.1 | Thale cress | plasma membrane | 30.0 | 37.7 |
| Os01t0368700-01 | Rice | cytosol, plasma membrane | 35.0 | 37.33 |
| Os03t0370400-01 | Rice | plastid | 29.58 | 36.79 |
| Os07t0645300-01 | Rice | plasma membrane, vacuole | 28.75 | 36.7 |
| Os08t0106501-01 | Rice | plastid | 33.75 | 36.16 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 48.75 | 30.95 |
| Os05t0562800-02 | Rice | plastid | 29.58 | 29.83 |
| Os01t0368500-00 | Rice | golgi, nucleus, plasma membrane | 36.67 | 27.67 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 29.17 | 27.67 |
| Os01t0882400-01 | Rice | cytosol, peroxisome | 25.83 | 25.94 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 43.75 | 23.76 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4325228 | EMBL:AK108444 | ProteinID:BAD68980.1 | ProteinID:BAF05022.1 | ProteinID:BAS72273.1 |
| InterPro:DMP | ProteinID:EAZ12013.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0010256 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | EnsemblPlantsGene:Os01g0389700 | EnsemblPlants:Os01t0389700-01 | PFAM:PF05078 |
| PANTHER:PTHR31621 | PANTHER:PTHR31621:SF5 | UniProt:Q5VNJ6 | TMHMM:TMhelix | UniParc:UPI0000457FF7 | RefSeq:XP_015631252.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF679 family protein. (Os01t0389700-01)
Coordinates
chr1:+:16435858..16436778
Molecular Weight (calculated)
25746.7 Da
IEP (calculated)
8.687
GRAVY (calculated)
-0.041
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPPGAIV INMASNTNGE STAVTTNNLA PSTPKAVDES TTSSKTDVAT KTVTDKVMAS TANLAQLLPT GTVLAYQALS PSFTNHGECN AANKWLTAVL
101: VGVLAGLSLF FSFTDSVVGQ DGKLYYGVAT RRGLNVFNMS REEEEAKKLS HSELRLRPLD FVHSFFTAMV FLTVAFSDVG LQNCFFGQNP GGNTKELLKN
201: LPLGMAFLSS FVFLIFPTKR KGIGYNDNTP NRKAEDVTKN
101: VGVLAGLSLF FSFTDSVVGQ DGKLYYGVAT RRGLNVFNMS REEEEAKKLS HSELRLRPLD FVHSFFTAMV FLTVAFSDVG LQNCFFGQNP GGNTKELLKN
201: LPLGMAFLSS FVFLIFPTKR KGIGYNDNTP NRKAEDVTKN
001: MSSPSSLTQR NPTSSQEQSE SVPQLRRQTS QHAVMSQTLT SAANLANLLP TGTLLAFTLL IPVFTSNGSC DYPTQVLTIV LLTLLSISCF LSSFTDSVKA
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
Arabidopsis Description
DMP3Protein DMP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STW3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.