Factsheet for TraesCS6B01G427800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G372600.1	Wheat	plastid	95.24	95.24
TraesCS6A01G388800.1	Wheat	plastid	90.48	90.48
TraesCS2B01G068400.1	Wheat	plastid	73.59	76.23
TraesCS6B01G427400.1	Wheat	plastid	74.89	75.88
TraesCS2B01G068500.1	Wheat	plastid	74.46	75.11
TraesCS2B01G068300.1	Wheat	plastid	74.03	74.67
TraesCS6B01G427600.1	Wheat	plastid	72.29	73.57
TraesCS6B01G427300.1	Wheat	plastid	71.0	71.62
TraesCS6B01G427700.1	Wheat	plastid	75.32	71.6
OQU76129	Sorghum	plastid	64.94	66.08
TraesCS7B01G024200.1	Wheat	cytosol, peroxisome, plastid, vacuole	66.23	61.94
TraesCS7B01G034700.1	Wheat	plastid	59.74	61.88
TraesCS7B01G024300.1	Wheat	plastid	62.34	61.8
KXG19680	Sorghum	plastid	64.5	61.07
TraesCS7B01G399300.1	Wheat	cytosol, peroxisome, plasma membrane	64.07	60.41
Os01t0389700-01	Rice	plastid	59.74	57.5
Zm00001d044777_P001	Maize	plastid	60.61	54.9
Os01t0389200-01	Rice	cytosol	60.61	53.03
TraesCS6B01G427500.1	Wheat	plasma membrane	56.28	51.38
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	43.72	44.49
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	41.56	44.44
TraesCS7B01G497700.1	Wheat	cytosol, peroxisome, plasma membrane	40.26	43.66
TraesCS7B01G499800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	45.89	43.44
TraesCS7B01G498800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	44.16	43.22
TraesCS7B01G499200.1	Wheat	vacuole	38.53	43.0
TraesCS7B01G498900.1	Wheat	plastid	42.86	41.25
AT5G27370.1	Thale cress	plasma membrane	29.87	36.13
TraesCS7B01G337100.1	Wheat	plasma membrane	29.87	35.75
TraesCS7B01G225000.1	Wheat	plastid	34.2	34.8
TraesCS6B01G469800.1	Wheat	plastid	35.5	33.2
TraesCS4B01G141000.1	Wheat	plastid	29.0	32.37
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	28.57	30.99
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	23.81	29.41
TraesCS3B01G440900.1	Wheat	plasma membrane	28.14	29.28
TraesCS1B01G424300.1	Wheat	plasma membrane	27.27	28.64
GSMUA_Achr5P26860_001	Banana	plasma membrane	42.42	22.17

Protein Annotations

EnsemblPlants:TraesCS6B01G427800.1	EnsemblPlantsGene:TraesCS6B01G427800	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF24	PFAM:PF05078
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:696112263..696112958

Molecular Weight (calculated)

25259.2 Da

IEP (calculated)

8.849

GRAVY (calculated)

0.020

Length

231 amino acids

Sequence
(BLAST)

001: MASSSSPSSK VTRITPPTND VDAGKITAAG AALPRPTTDR VMSSVANLAQ LLPTGTVLTY QALSPSFTNH GKCETSSSNQ WLTAALVAVL PAMCIFFSFT
101: DSVIGHHDGK LYYGVATTHG FNVFNFSDED ERREWSGLDE FRRLRLQPLD FVHGFFAAVI FLTVAFSDVG LQNCFFPDAG RNTQELLKNL PLGMAFLSSS
201: VFIIFPTKRK GIGFNYTTPR QKVIHPSLNK V

Best Arabidopsis Sequence Match ( AT5G27370.1 )
(BLAST)

001: MEASFIRSLP SAGNFANLLP TGTALIFETL LPSFSNGGEC NNKPVNKLLT ITLISFCAAA CFFSSFTDSY VGQDGRIYYG IATSNGLHIL NDYPDEGYDP
101: ESGLTADKRE RYKLSFVDFV HAFVSVIVFL ALAVESSDFR RCLLPEDDEN SWGGHFVLMI KYFAVMVLTM ASFFFAIFPS KRRGIGISDI R

Arabidopsis Description

DMP10Protein DMP10 [Source:UniProtKB/Swiss-Prot;Acc:Q3E912]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.