Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G372200.1 | Wheat | plastid | 96.94 | 96.94 |
| TraesCS6A01G388100.1 | Wheat | plastid | 92.58 | 92.58 |
| TraesCS6B01G427600.1 | Wheat | plastid | 81.22 | 81.94 |
| TraesCS2B01G068300.1 | Wheat | plastid | 72.93 | 72.93 |
| TraesCS6B01G427400.1 | Wheat | plastid | 71.62 | 71.93 |
| TraesCS2B01G068400.1 | Wheat | plastid | 69.43 | 71.3 |
| TraesCS6B01G427800.1 | Wheat | plastid | 71.62 | 71.0 |
| TraesCS2B01G068500.1 | Wheat | plastid | 70.74 | 70.74 |
| TraesCS6B01G427700.1 | Wheat | plastid | 74.24 | 69.96 |
| OQU76129 | Sorghum | plastid | 60.26 | 60.79 |
| TraesCS7B01G024300.1 | Wheat | plastid | 61.14 | 60.09 |
| TraesCS7B01G024200.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 64.63 | 59.92 |
| KXG19680 | Sorghum | plastid | 62.88 | 59.02 |
| TraesCS7B01G399300.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.57 | 57.55 |
| Os01t0389700-01 | Rice | plastid | 58.52 | 55.83 |
| TraesCS7B01G034700.1 | Wheat | plastid | 54.15 | 55.61 |
| Zm00001d044777_P001 | Maize | plastid | 59.83 | 53.73 |
| Os01t0389200-01 | Rice | cytosol | 58.52 | 50.76 |
| TraesCS6B01G427500.1 | Wheat | plasma membrane | 55.9 | 50.59 |
| TraesCS2B01G179200.1 | Wheat | cytosol, peroxisome, vacuole | 44.98 | 45.37 |
| TraesCS6B01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.48 | 43.98 |
| TraesCS7B01G499800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 45.85 | 43.03 |
| TraesCS7B01G499200.1 | Wheat | vacuole | 38.86 | 43.0 |
| TraesCS7B01G497700.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.74 | 42.72 |
| TraesCS7B01G498800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 43.67 | 42.37 |
| TraesCS7B01G498900.1 | Wheat | plastid | 43.67 | 41.67 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 29.26 | 34.72 |
| AT5G27370.1 | Thale cress | plasma membrane | 28.38 | 34.03 |
| TraesCS7B01G225000.1 | Wheat | plastid | 33.62 | 33.92 |
| TraesCS6B01G469800.1 | Wheat | plastid | 34.06 | 31.58 |
| TraesCS1B01G424300.1 | Wheat | plasma membrane | 30.13 | 31.36 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 28.82 | 30.99 |
| TraesCS4B01G141000.1 | Wheat | plastid | 27.95 | 30.92 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 29.69 | 30.63 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 24.89 | 30.48 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 44.98 | 23.3 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G427300.1 | EnsemblPlantsGene:TraesCS6B01G427300 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF24 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:696015166..696015855
Molecular Weight (calculated)
25119.9 Da
IEP (calculated)
5.575
GRAVY (calculated)
0.029
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSSPSST AIQITPPTAT KDVDDDNEIP VPDTVPPPTA TPTMDRVMSG VANLAQLLPT GTVLAYQALS PSFTNHGKCE TSNQWLTVAL VVVLTVMCLF
101: FSFTDSIVSR DGKLYYGLAT PRGFNVFDFS REDESHEWSR DQLRSLHLRP LDFVHSLFAA VLFLTVAFSD VGLQNCFFPD ASRNAQELLK NLPLGMAFLS
201: TVVFTIFPTK RKGIGFSDST PRPKVDHLN
101: FSFTDSIVSR DGKLYYGLAT PRGFNVFDFS REDESHEWSR DQLRSLHLRP LDFVHSLFAA VLFLTVAFSD VGLQNCFFPD ASRNAQELLK NLPLGMAFLS
201: TVVFTIFPTK RKGIGFSDST PRPKVDHLN
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.