Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G427300.1 | Wheat | plastid | 96.94 | 96.94 |
| TraesCS6A01G388100.1 | Wheat | plastid | 94.32 | 94.32 |
| TraesCS6D01G372600.1 | Wheat | plastid | 74.24 | 73.59 |
| TraesCS6D01G372400.1 | Wheat | plastid | 72.93 | 73.25 |
| TraesCS2D01G054400.1 | Wheat | plastid | 70.74 | 70.74 |
| TraesCS6D01G372300.1 | Wheat | plastid | 70.74 | 68.94 |
| TraesCS6D01G372500.1 | Wheat | plastid | 72.49 | 68.59 |
| TraesCS2D01G054300.1 | Wheat | plastid | 72.05 | 68.18 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 51.97 | 66.48 |
| OQU76129 | Sorghum | plastid | 61.14 | 61.67 |
| TraesCS7D01G479500.1 | Wheat | plastid | 65.94 | 61.38 |
| KXG19680 | Sorghum | plastid | 63.32 | 59.43 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 63.76 | 59.11 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.88 | 58.78 |
| Os01t0389700-01 | Rice | plastid | 58.95 | 56.25 |
| Zm00001d044777_P001 | Maize | plastid | 59.39 | 53.33 |
| Os01t0389200-01 | Rice | cytosol | 59.39 | 51.52 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 46.29 | 49.77 |
| TraesCS7D01G547000.1 | Wheat | plastid | 46.29 | 43.98 |
| TraesCS6D01G113400.1 | Wheat | plastid | 40.61 | 43.46 |
| TraesCS6D01G113300.1 | Wheat | plastid | 40.61 | 43.26 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 38.43 | 42.51 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 43.23 | 39.29 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 59.39 | 35.98 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 25.76 | 35.33 |
| AT5G27370.1 | Thale cress | plasma membrane | 28.82 | 34.55 |
| TraesCS7D01G320400.1 | Wheat | plastid | 34.5 | 34.5 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 30.13 | 31.36 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 29.69 | 30.63 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 33.62 | 30.56 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 27.95 | 30.33 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 33.62 | 30.2 |
| TraesCS4D01G004900.1 | Wheat | plastid | 32.75 | 30.0 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 33.19 | 29.8 |
| TraesCS4D01G135800.1 | Wheat | plastid | 28.38 | 29.68 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.33 | 27.1 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 45.41 | 23.53 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G372200.1 | EnsemblPlantsGene:TraesCS6D01G372200 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF24 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:457584771..457585460
Molecular Weight (calculated)
25040.7 Da
IEP (calculated)
5.211
GRAVY (calculated)
0.015
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSSPSST AIQITPPTAT KDVDDDDEIP APDTVPPPTA TPTMDRVMSG VANLAQLLPT GTVLAYQALS PSFTNHGKCE TSNQWLTVAL VAVLTVMCLF
101: FSFTDSIVSR DGKLYYGVAT PRGFNVFDFS REDESHEWSR DQLRSLHLRP LDFVHSFFAA VLFLTVAFSD VGLQNCFFPD ASRNAQELLK NLPLGMAFLS
201: TVVFAIFPTK RKGVGFSDST PRPKVDHLN
101: FSFTDSIVSR DGKLYYGVAT PRGFNVFDFS REDESHEWSR DQLRSLHLRP LDFVHSFFAA VLFLTVAFSD VGLQNCFFPD ASRNAQELLK NLPLGMAFLS
201: TVVFAIFPTK RKGVGFSDST PRPKVDHLN
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.