Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G427700.1 | Wheat | plastid | 96.69 | 96.3 |
| TraesCS6A01G388700.1 | Wheat | plastid | 94.63 | 94.63 |
| HORVU6Hr1G090450.1 | Barley | plastid | 85.54 | 90.39 |
| TraesCS2D01G054300.1 | Wheat | plastid | 86.78 | 86.78 |
| TraesCS6D01G372300.1 | Wheat | plastid | 80.17 | 82.55 |
| TraesCS2D01G054400.1 | Wheat | plastid | 73.55 | 77.73 |
| TraesCS6D01G372600.1 | Wheat | plastid | 72.31 | 75.76 |
| TraesCS6D01G372400.1 | Wheat | plastid | 71.07 | 75.44 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 53.72 | 72.63 |
| TraesCS6D01G372200.1 | Wheat | plastid | 68.59 | 72.49 |
| TraesCS7D01G479500.1 | Wheat | plastid | 66.12 | 65.04 |
| OQU76129 | Sorghum | plastid | 60.33 | 64.32 |
| KXG19680 | Sorghum | plastid | 64.46 | 63.93 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.46 | 63.67 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 64.05 | 62.75 |
| Zm00001d044777_P001 | Maize | plastid | 61.98 | 58.82 |
| Os01t0389700-01 | Rice | plastid | 57.85 | 58.33 |
| Os01t0389200-01 | Rice | cytosol | 57.02 | 52.27 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 44.63 | 50.7 |
| TraesCS6D01G113300.1 | Wheat | plastid | 42.56 | 47.91 |
| TraesCS6D01G113400.1 | Wheat | plastid | 41.32 | 46.73 |
| TraesCS7D01G547000.1 | Wheat | plastid | 43.8 | 43.98 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 36.78 | 43.0 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 65.7 | 42.06 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 42.98 | 41.27 |
| AT5G27370.1 | Thale cress | plasma membrane | 28.51 | 36.13 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 31.41 | 36.02 |
| TraesCS7D01G320400.1 | Wheat | plastid | 33.06 | 34.93 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 35.54 | 33.73 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 34.71 | 33.33 |
| TraesCS4D01G135800.1 | Wheat | plastid | 29.75 | 32.88 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 29.75 | 32.73 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 34.3 | 32.55 |
| TraesCS4D01G004900.1 | Wheat | plastid | 33.47 | 32.4 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 22.31 | 32.34 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.86 | 30.37 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 26.86 | 29.28 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 42.15 | 23.08 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G372500.1 | EnsemblPlantsGene:TraesCS6D01G372500 | InterPro:DMP | PANTHER:PTHR31621 | PFAM:PF05078 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:457635623..457636442
Molecular Weight (calculated)
26313.3 Da
IEP (calculated)
6.109
GRAVY (calculated)
0.062
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSSPT AIQIHPLTNE DDGKITAAGT APPTPTTGPA PATVMSSVSN LAQLLPTGTV LAYQALSPSF TNHGKCETSN QWLTGALVVV LTVSCLFFAF
101: TDSVVGRRDG KLYYGFATLR GFNVFNFSSE EERNEWNDLD QFRKLRLRPL DFVHAFFAAV VFLTVAFSDV GLQNCFFPEA GRNTEELLKN LPMGMAFLSS
201: FVFIIFPTKR KGIGFTDNAP RQKEIHTQSD LTTPLLAGVE VA
101: TDSVVGRRDG KLYYGFATLR GFNVFNFSSE EERNEWNDLD QFRKLRLRPL DFVHAFFAAV VFLTVAFSDV GLQNCFFPEA GRNTEELLKN LPMGMAFLSS
201: FVFIIFPTKR KGIGFTDNAP RQKEIHTQSD LTTPLLAGVE VA
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.