Factsheet for TraesCS1D01G403800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G395800.1	Wheat	plasma membrane	99.09	98.64
TraesCS1B01G424300.1	Wheat	plasma membrane	95.91	95.91
HORVU1Hr1G087380.1	Barley	mitochondrion	92.73	83.27
Os05t0562800-02	Rice	plastid	77.27	71.43
EES19945	Sorghum	cytosol	76.82	70.71
Zm00001d009557_P001	Maize	cytosol	75.0	69.92
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	56.36	57.94
GSMUA_Achr8P19660_001	Banana	cytosol	52.27	56.37
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	48.64	50.71
GSMUA_Achr10P...	Banana	cytosol	50.45	47.64
TraesCS4D01G135800.1	Wheat	plastid	42.27	42.47
TraesCS7D01G320400.1	Wheat	plastid	40.0	38.43
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	28.18	37.13
TraesCS2D01G145200.1	Wheat	cytosol, peroxisome, vacuole	34.09	35.55
TraesCS2D01G159400.1	Wheat	peroxisome	34.09	35.21
TraesCS7D01G133200.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	28.18	34.64
TraesCS6D01G113400.1	Wheat	plastid	33.64	34.58
TraesCS6D01G113300.1	Wheat	plastid	33.18	33.95
TraesCS3D01G402600.1	Wheat	plasma membrane	32.27	31.98
TraesCS7D01G547500.1	Wheat	peroxisome, plasma membrane, vacuole	30.0	31.88
TraesCS6D01G372400.1	Wheat	plastid	31.82	30.7
TraesCS2D01G054400.1	Wheat	plastid	31.82	30.57
TraesCS6D01G372200.1	Wheat	plastid	31.36	30.13
TraesCS6D01G372500.1	Wheat	plastid	32.73	29.75
TraesCS2D01G054300.1	Wheat	plastid	32.27	29.34
TraesCS6D01G372300.1	Wheat	plastid	30.91	28.94
TraesCS7D01G479500.1	Wheat	plastid	32.27	28.86
TraesCS7D01G479400.1	Wheat	cytosol, peroxisome, plasma membrane	31.36	28.16
TraesCS7D01G479700.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	31.36	27.94
TraesCS6D01G372600.1	Wheat	plastid	28.64	27.27
TraesCS6D01G407200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	30.45	26.59
TraesCS4D01G004900.1	Wheat	plastid	29.55	26.0
TraesCS6D01G407100.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	30.0	25.88
TraesCS5D01G483300.1	Wheat	cytosol, golgi, peroxisome	29.55	25.49
TraesCS7D01G547000.1	Wheat	plastid	27.27	24.9
TraesCS7D01G547800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	28.18	24.6
TraesCS2D01G054200.1	Wheat	plasma membrane	25.91	15.08

Protein Annotations

EnsemblPlants:TraesCS1D01G403800.1	EnsemblPlantsGene:TraesCS1D01G403800	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1D:+:468721319..468721981

Molecular Weight (calculated)

23558.5 Da

IEP (calculated)

6.620

GRAVY (calculated)

0.309

Length

220 amino acids

Sequence
(BLAST)

001: MAAQNEVVAR QGREDEVHGV DEERPLLARP PAVRDDPGDG LSPMQRAISQ TYQSTAHLAT LLPTGTVMAF QLLSPIVTDQ GHCVRANRAM AGALVALCGL
101: SCFALSFTDS FRDAKGAVRY GFATRRGLWV IDGGAPLDPQ AAAAYRLRFL DLVHAVVTVM VFVAVALFDH NVVSCFYPVP SEDAAQVLTV LPIAIGVVGS
201: MLFVTFPTTR HGIGFPLSQH

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.