Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G427400.1 | Wheat | plastid | 91.06 | 93.86 |
| HORVU6Hr1G090460.1 | Barley | plastid | 88.09 | 85.19 |
| TraesCS2D01G054300.1 | Wheat | plastid | 82.98 | 80.58 |
| TraesCS6D01G372500.1 | Wheat | plastid | 82.55 | 80.17 |
| TraesCS2D01G054400.1 | Wheat | plastid | 74.04 | 75.98 |
| TraesCS6D01G372400.1 | Wheat | plastid | 72.77 | 75.0 |
| TraesCS6D01G372600.1 | Wheat | plastid | 73.19 | 74.46 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 54.47 | 71.51 |
| TraesCS6D01G372200.1 | Wheat | plastid | 68.94 | 70.74 |
| OQU76129 | Sorghum | plastid | 60.85 | 63.0 |
| KXG19680 | Sorghum | plastid | 65.11 | 62.7 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.11 | 62.45 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 65.53 | 62.35 |
| TraesCS7D01G479500.1 | Wheat | plastid | 65.11 | 62.2 |
| Os01t0389700-01 | Rice | plastid | 60.0 | 58.75 |
| Zm00001d044777_P001 | Maize | plastid | 61.7 | 56.86 |
| Os01t0389200-01 | Rice | cytosol | 56.6 | 50.38 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 45.11 | 49.77 |
| TraesCS6D01G113300.1 | Wheat | plastid | 42.98 | 46.98 |
| TraesCS6D01G113400.1 | Wheat | plastid | 42.13 | 46.26 |
| TraesCS7D01G547000.1 | Wheat | plastid | 43.83 | 42.74 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 37.45 | 42.51 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.11 | 42.06 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 66.81 | 41.53 |
| AT5G27370.1 | Thale cress | plasma membrane | 30.21 | 37.17 |
| TraesCS7D01G320400.1 | Wheat | plastid | 33.62 | 34.5 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 29.79 | 33.18 |
| TraesCS4D01G135800.1 | Wheat | plastid | 30.64 | 32.88 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 34.89 | 32.16 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 22.55 | 31.74 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 33.62 | 31.35 |
| TraesCS4D01G004900.1 | Wheat | plastid | 33.19 | 31.2 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 33.62 | 30.98 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 28.94 | 30.91 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.38 | 28.97 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 27.23 | 28.83 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 42.13 | 22.4 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G372300.1 | EnsemblPlantsGene:TraesCS6D01G372300 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF24 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:457590050..457590848
Molecular Weight (calculated)
25787.8 Da
IEP (calculated)
5.998
GRAVY (calculated)
0.088
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSPSST TIQIHPLTTE EITTATTAAP MPSTRPPPAT VMSSVANLAQ LLPTGTVLAY QALSPSFTNH GKCETSNQWL TGVLVVVLAI LCLFFSFTDS
101: VVGRRDGKLY YGFATLHGFN VFNFSSEEER QEWDDLDQFR RLRLRPLDFV HSFFAAVVFL TVAFSDVGLQ NCFFQDAGRN TEELLKNLPM GMAFLSSFVF
201: IIFPTKRKGI GFSDTAPPQK ESHAQSDLTT PLLAG
101: VVGRRDGKLY YGFATLHGFN VFNFSSEEER QEWDDLDQFR RLRLRPLDFV HSFFAAVVFL TVAFSDVGLQ NCFFQDAGRN TEELLKNLPM GMAFLSSFVF
201: IIFPTKRKGI GFSDTAPPQK ESHAQSDLTT PLLAG
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.