Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G141700.1 | Wheat | cytosol, peroxisome, vacuole | 97.16 | 97.16 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 95.26 | 94.37 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 94.79 | 94.34 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 47.87 | 92.66 |
| Os07t0645300-01 | Rice | plasma membrane, vacuole | 71.56 | 80.32 |
| Zm00001d007047_P001 | Maize | golgi, plasma membrane, vacuole | 64.93 | 72.11 |
| EER97642 | Sorghum | peroxisome | 69.19 | 66.06 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 42.18 | 44.06 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 42.18 | 43.63 |
| Bra023875.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 41.71 | 43.56 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 41.71 | 43.56 |
| Bra031287.1-P | Field mustard | plasma membrane | 41.71 | 43.14 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.71 | 42.51 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 32.23 | 40.72 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 7.58 | 35.56 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 34.6 | 34.27 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 35.55 | 34.09 |
| TraesCS6D01G113300.1 | Wheat | plastid | 34.6 | 33.95 |
| TraesCS6D01G113400.1 | Wheat | plastid | 34.12 | 33.64 |
| TraesCS7D01G320400.1 | Wheat | plastid | 36.02 | 33.19 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 27.96 | 32.96 |
| TraesCS4D01G135800.1 | Wheat | plastid | 33.65 | 32.42 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.23 | 31.78 |
| TraesCS2D01G054400.1 | Wheat | plastid | 34.12 | 31.44 |
| TraesCS6D01G372500.1 | Wheat | plastid | 36.02 | 31.41 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 30.81 | 31.4 |
| TraesCS2D01G054300.1 | Wheat | plastid | 35.55 | 30.99 |
| TraesCS6D01G372400.1 | Wheat | plastid | 33.18 | 30.7 |
| TraesCS6D01G372600.1 | Wheat | plastid | 32.7 | 29.87 |
| TraesCS6D01G372300.1 | Wheat | plastid | 33.18 | 29.79 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 31.28 | 29.73 |
| TraesCS7D01G479500.1 | Wheat | plastid | 34.12 | 29.27 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 33.65 | 28.74 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.7 | 28.16 |
| TraesCS6D01G372200.1 | Wheat | plastid | 30.33 | 27.95 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 31.28 | 25.88 |
| TraesCS7D01G547000.1 | Wheat | plastid | 29.38 | 25.73 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 29.86 | 25.0 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 29.86 | 24.71 |
| TraesCS4D01G004900.1 | Wheat | plastid | 28.91 | 24.4 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 28.91 | 24.21 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 26.07 | 14.55 |
Protein Annotations
| MapMan:35.1 | InterPro:DMP | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005783 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 |
| GO:GO:0010256 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0061025 | GO:GO:0090148 | GO:GO:0090158 |
| GO:GO:0090693 | PFAM:PF05078 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF1 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G145200 |
| EnsemblPlants:TraesCS2D01G145200.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:86716381..86717016
Molecular Weight (calculated)
21901.4 Da
IEP (calculated)
7.289
GRAVY (calculated)
0.458
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGIKEAES SKKAAAVEST ATKVGAMADA TFGSIGDVLK LLPTSTVIVY EVLNPIVTNA GACSVANRVV TAVLLVLCAF SCAFSAFTDS FVGADGKVRY
101: GLVTPRGLLP FGGGDDDDTG ARDFSKYRLR PADFAHAFFS VVVFAAVALL ADANTVACFY PALREQQKQV VMALPVVVGA LASGVFVVFP SKRHSIGYPP
201: AKPAASSLAS Q
101: GLVTPRGLLP FGGGDDDDTG ARDFSKYRLR PADFAHAFFS VVVFAAVALL ADANTVACFY PALREQQKQV VMALPVVVGA LASGVFVVFP SKRHSIGYPP
201: AKPAASSLAS Q
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.