Factsheet for Bra023875.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, vacuole, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37281	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	100.0	100.0
CDY19287	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	98.02	98.02
Bra031287.1-P	Field mustard	plasma membrane	90.1	89.22
AT3G21520.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	90.1	87.92
Bra023874.1-P	Field mustard	plasma membrane	43.56	47.57
Bra031289.1-P	Field mustard	plasma membrane	42.08	45.95
Zm00001d007047_P001	Maize	golgi, plasma membrane, vacuole	41.58	44.21
Os07t0645300-01	Rice	plasma membrane, vacuole	41.09	44.15
HORVU5Hr1G034760.1	Barley	plasma membrane	23.27	43.12
TraesCS2D01G145200.1	Wheat	cytosol, peroxisome, vacuole	43.56	41.71
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	43.56	41.31
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	43.07	41.23
HORVU2Hr1G025080.1	Barley	cytosol, peroxisome, vacuole	42.08	40.09
EER97642	Sorghum	peroxisome	43.07	39.37
Bra010492.1-P	Field mustard	plastid	38.12	35.16
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.63	34.58
Bra013790.1-P	Field mustard	plasma membrane, plastid	37.62	34.55
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	33.17	33.5
Bra021460.1-P	Field mustard	plasma membrane, plastid	36.14	33.03
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.64	32.14
Bra011032.1-P	Field mustard	plasma membrane	31.19	31.5
Bra006030.1-P	Field mustard	plasma membrane	28.71	30.69
Bra025039.1-P	Field mustard	plasma membrane	32.67	30.41
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	22.28	28.12
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.67	27.39
Bra025657.1-P	Field mustard	plastid	32.18	26.64

Protein Annotations

EnsemblPlants:Bra023875.1	EnsemblPlants:Bra023875.1-P	EnsemblPlantsGene:Bra023875	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF1	PFAM:PF05078	SEG:seg	TMHMM:TMhelix
UniParc:UPI000254453F	UniProt:M4E521	MapMan:35.1	:	:	:

Description

AT3G21520 (E=4e-089) | unknown protein

Coordinates

chrA01:-:20700977..20701585

Molecular Weight (calculated)

21574.2 Da

IEP (calculated)

8.462

GRAVY (calculated)

0.304

Length

202 amino acids

Sequence
(BLAST)

001: MSEASSLLIP KTNSPVSSKL MANKSLTGLE SLIKLLPTGT LFIYLLLNPV LTNDGECSTA NKVMSSILVA LCSFSCVFSC FTDSFKGTDG SRKYGIVTKT
101: GLWTYADPGS VDLSKYKLRI ADFVHAVFVV AVFGTLVLLD ANTASCFYPR FRETQKTLIM ALPPAVGVAS AAIFAIFPSK RNGIGYAPVG EEEETKKGSD
201: SA

Best Arabidopsis Sequence Match ( AT3G21520.1 )
(BLAST)

001: MSETSLLIPK TNSPASSENM ANTNKSLTGL ESLIKLLPTG TLFIYLLLNP VLTNDGECST GNKVMSSILV ALCSFSCVFS CFTDSFKGVD GSRKFGIVTK
101: KGLWTYAEPG SVDLSKYKLR IADFVHAGFV LAVFGTLVLL DANTASCFYP RFRETQKTLV MALPPAVGVA SATIFALFPS KRSGIGYAPI AEEVGAEEET
201: KKASVSA

Arabidopsis Description

DMP1Protein DMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVF4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.