Factsheet for Bra021010.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76524	Canola	cytosol, peroxisome, plasma membrane	98.6	98.6
CDY55785	Canola	cytosol, peroxisome, plasma membrane	97.66	97.66
CDX76523	Canola	cytosol, peroxisome, plasma membrane	97.66	97.66
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	85.51	85.92
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	89.25	85.27
Bra025039.1-P	Field mustard	plasma membrane	66.36	65.44
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.9	64.73
PGSC0003DMT400081227	Potato	plasma membrane	63.08	64.59
VIT_13s0106g00720.t01	Wine grape	plasma membrane	61.22	62.09
Solyc02g077640.1.1	Tomato	plasma membrane	60.28	61.72
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	57.94	58.77
GSMUA_Achr4P10580_001	Banana	cytosol	54.67	56.25
GSMUA_Achr4P02720_001	Banana	plasma membrane	55.14	55.92
KRH20387	Soybean	plasma membrane	56.07	55.3
VIT_10s0003g00320.t01	Wine grape	plasma membrane	60.75	53.06
KRH50120	Soybean	peroxisome	47.2	48.56
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	47.2	48.56
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	42.06	48.13
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	46.73	46.73
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	45.33	46.63
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	46.26	45.41
Os05t0562800-02	Rice	plastid	50.0	44.96
HORVU1Hr1G087380.1	Barley	mitochondrion	51.4	44.9
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	41.59	44.5
Bra011032.1-P	Field mustard	plasma membrane	41.12	44.0
Bra010492.1-P	Field mustard	plastid	43.93	42.92
Bra021460.1-P	Field mustard	plasma membrane, plastid	43.46	42.08
Bra013790.1-P	Field mustard	plasma membrane, plastid	40.65	39.55
Bra031289.1-P	Field mustard	plasma membrane	34.11	39.46
Bra023874.1-P	Field mustard	plasma membrane	33.64	38.92
Os06t0352200-01	Rice	plasma membrane, plastid	44.39	37.55
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	34.58	36.63
Bra031287.1-P	Field mustard	plasma membrane	32.71	34.31
Bra006030.1-P	Field mustard	plasma membrane	28.97	32.8
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	24.3	32.5
Bra025657.1-P	Field mustard	plastid	33.64	29.51

Protein Annotations

EnsemblPlants:Bra021010.1	EnsemblPlants:Bra021010.1-P	EnsemblPlantsGene:Bra021010	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	TMHMM:TMhelix	UniParc:UPI000254728E
UniProt:M4DWW4	MapMan:35.1	:	:	:	:

Description

AT4G18425 (E=2e-105) | unknown protein

Coordinates

chrA08:-:10516520..10517164

Molecular Weight (calculated)

23611.5 Da

IEP (calculated)

5.222

GRAVY (calculated)

0.259

Length

214 amino acids

Sequence
(BLAST)

001: MEIKVVEDHQ LSTKEDIEKP LLEENKGFPD VERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLAC KIMTSSLVAI CGFSCFILSF
101: TDSYKDKNGT FCYGFATIHG FWIIDGSATL PQELAKNYKL RFIDFAHAFM SFLVFGAVVL FDRNTVNCFY PAPSAEELEF LTALPVGVGV FCSMLFATFP
201: TTRNGIGFPV PGNK

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.