Factsheet for Bra025040.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70034	Canola	cytosol, peroxisome, plasma membrane	98.76	98.76
CDY38243	Canola	cytosol	54.77	97.06
AT5G46090.1	Thale cress	plasma membrane	68.46	77.1
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.73	72.9
Bra025039.1-P	Field mustard	plasma membrane	64.32	71.43
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.07	67.86
PGSC0003DMT400081227	Potato	plasma membrane	56.02	64.59
VIT_13s0106g00720.t01	Wine grape	plasma membrane	56.02	63.98
Solyc02g077640.1.1	Tomato	plasma membrane	55.19	63.64
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	52.28	59.72
GSMUA_Achr4P10580_001	Banana	cytosol	48.96	56.73
KRH20387	Soybean	plasma membrane	51.04	56.68
GSMUA_Achr4P02720_001	Banana	plasma membrane	48.96	55.92
VIT_10s0003g00320.t01	Wine grape	plasma membrane	54.77	53.88
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	43.57	50.48
KRH50120	Soybean	peroxisome	42.32	49.04
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	40.25	48.5
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	41.49	48.08
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	41.49	46.73
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	36.1	46.52
HORVU1Hr1G087380.1	Barley	mitochondrion	46.89	46.12
Bra011032.1-P	Field mustard	plasma membrane	38.17	46.0
Os05t0562800-02	Rice	plastid	45.23	45.8
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	40.25	44.5
Bra021460.1-P	Field mustard	plasma membrane, plastid	38.59	42.08
Bra010492.1-P	Field mustard	plastid	37.76	41.55
Bra013790.1-P	Field mustard	plasma membrane, plastid	35.27	38.64
Os06t0352200-01	Rice	plasma membrane, plastid	39.83	37.94
Bra031289.1-P	Field mustard	plasma membrane	27.8	36.22
Bra023874.1-P	Field mustard	plasma membrane	27.39	35.68
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	27.39	32.67
Bra006030.1-P	Field mustard	plasma membrane	25.31	32.28
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	20.75	31.25
Bra031287.1-P	Field mustard	plasma membrane	25.73	30.39
Bra025657.1-P	Field mustard	plastid	29.46	29.1

Protein Annotations

EnsemblPlants:Bra025040.1	EnsemblPlants:Bra025040.1-P	EnsemblPlantsGene:Bra025040	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	TMHMM:TMhelix	UniParc:UPI000253FBE5
UniProt:M4E8D4	MapMan:35.1	:	:	:	:

Description

AT5G46090 (E=1e-086) | unknown protein

Coordinates

chrA06:-:24837994..24838719

Molecular Weight (calculated)

26924.7 Da

IEP (calculated)

5.706

GRAVY (calculated)

0.229

Length

241 amino acids

Sequence
(BLAST)

001: MEIKVDEEAG IDDAHRIIEA EKVRRRIEAE KLRRVIQEEK VPLLEDDKIL IQTREFPAIE RNTWIQKAIG QTFQTTSHLA NLLPTGTVLA YQILSPIFTN
101: AGSCSLASRF MTATLVFICG FSCFILSFTD SYKDLNGNSC YGFATFNGFW IIDGSATLPP ERARTYKLRF IDFAHAIMSF LVFGAVVMFD QNAVKCFIPV
201: PSAEEAEILT ALPVGIGVFC SMLFAIFPTT RHGIGFSLSD K

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.