CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	93.75	93.75
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	68.75	76.47
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	75.0	72.9
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	75.48	72.02
GSMUA_Achr4P02720_001	Banana	plasma membrane	63.46	62.56
GSMUA_Achr4P10580_001	Banana	cytosol	62.02	62.02
EES19945	Sorghum	cytosol	67.31	58.58
PGSC0003DMT400081227	Potato	plasma membrane	56.25	55.98
VIT_13s0106g00720.t01	Wine grape	plasma membrane	55.77	54.98
Solyc02g077640.1.1	Tomato	plasma membrane	54.81	54.55
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	53.85	53.08
AT5G46090.1	Thale cress	plasma membrane	52.4	50.93
KRH20387	Soybean	plasma membrane	52.88	50.69
VIT_12s0028g03070.t01	Wine grape	plasma membrane	50.48	49.07
CDY33452	Canola	plasma membrane	50.0	47.93
KRH55890	Soybean	plasma membrane	47.6	47.83
Bra025039.1-P	Field mustard	plasma membrane	49.52	47.47
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	48.56	47.42
CDX76524	Canola	cytosol, peroxisome, plasma membrane	48.56	47.2
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.56	47.2
CDX76523	Canola	cytosol, peroxisome, plasma membrane	48.56	47.2
CDY55785	Canola	cytosol, peroxisome, plasma membrane	48.56	47.2
Solyc10g008970.1.1	Tomato	plasma membrane	49.52	47.03
PGSC0003DMT400035732	Potato	plasma membrane	50.0	46.64
CDY34571	Canola	plasma membrane	48.56	46.54
VIT_10s0003g00320.t01	Wine grape	plasma membrane	54.81	46.53
CDX77630	Canola	plasma membrane	47.6	45.62
CDY60883	Canola	cytosol	48.08	44.64
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.6	44.2
CDX78854	Canola	cytosol, peroxisome, plasma membrane	47.6	44.2
Solyc12g005490.1.1	Tomato	plasma membrane	47.6	44.0
CDX77629	Canola	cytosol, peroxisome, plasma membrane	50.48	43.57
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.48	43.57
CDY70034	Canola	cytosol, peroxisome, plasma membrane	50.48	43.57
KRH50120	Soybean	peroxisome	43.27	43.27
EES05060	Sorghum	cytosol, plasma membrane, vacuole	42.79	42.79
KXG32858	Sorghum	plastid	26.44	35.48
EER88463	Sorghum	plastid	46.15	34.53
EER94799	Sorghum	plasma membrane	31.73	34.2
CDY38243	Canola	cytosol	21.15	32.35
KXG32269	Sorghum	cytosol, peroxisome, plasma membrane	35.1	31.6
EER97642	Sorghum	peroxisome	33.17	31.22
EER89477	Sorghum	plastid	31.73	31.13
KXG19859	Sorghum	plasma membrane	33.65	30.84
EES14365	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	36.06	30.0
KXG32859	Sorghum	plastid	30.77	28.19
EES01865	Sorghum	plasma membrane	29.81	27.93
KXG19680	Sorghum	plastid	32.21	27.46
OQU76129	Sorghum	plastid	29.33	26.87

Protein Annotations

EnsemblPlants:KXG33079	EnsemblPlantsGene:SORBI_3003G251900	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DMP
PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	ProteinID:KXG33079	ProteinID:KXG33079.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0003C6EF33	UniProt:A0A1B6Q579	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:59004369..59004995

Molecular Weight (calculated)

22500.4 Da

IEP (calculated)

7.111

GRAVY (calculated)

0.306

Length

208 amino acids

Sequence
(BLAST)

001: MAATHLDAEL QHNEIRPLLS NRADGNNNMS PMQKAIGQTY QSTAHLAKLL PSGTVLSFQI LAPTLAKQGH CSDMNRMMTG GLVVLCALSC FVLSFTDSFR
101: DEEGKVRYGF ATFRGLWVID GGAPLEPLAA AGFRMRFIDF VHAIVSAIIF VAIALFDQNV VSCFYPTPSE DTKQLLTALP VAIGVIGSML FVSFPTTRHS
201: IGSTLSSQ

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.