Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- plasma membrane 1
- extracellular 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046149_P001 | Maize | plastid | 77.7 | 85.04 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 68.7 | 75.49 |
| GSMUA_Achr8P19660_001 | Banana | cytosol | 37.41 | 50.98 |
| EES05060 | Sorghum | cytosol, plasma membrane, vacuole | 36.69 | 49.04 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, vacuole | 35.61 | 46.92 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 34.53 | 46.15 |
| EES19945 | Sorghum | cytosol | 38.13 | 44.35 |
| GSMUA_Achr10P... | Banana | cytosol | 35.97 | 42.92 |
| EER89477 | Sorghum | plastid | 25.18 | 33.02 |
| KXG32858 | Sorghum | plastid | 18.35 | 32.9 |
| EES14365 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 29.5 | 32.8 |
| EER94799 | Sorghum | plasma membrane | 22.66 | 32.64 |
| EES01865 | Sorghum | plasma membrane | 25.18 | 31.53 |
| EER97642 | Sorghum | peroxisome | 24.82 | 31.22 |
| KXG32859 | Sorghum | plastid | 24.1 | 29.52 |
| KXG32269 | Sorghum | cytosol, peroxisome, plasma membrane | 24.1 | 29.0 |
| OQU76129 | Sorghum | plastid | 23.38 | 28.63 |
| KXG19680 | Sorghum | plastid | 24.46 | 27.87 |
| KXG19859 | Sorghum | plasma membrane | 22.3 | 27.31 |
Protein Annotations
| MapMan:35.1 | EntrezGene:8072661 | UniProt:C5Z412 | InterPro:DMP | EnsemblPlants:EER88463 | ProteinID:EER88463 |
| ProteinID:EER88463.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0010256 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | PFAM:PF05078 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF3 | EnsemblPlantsGene:SORBI_3010G158200 |
| TMHMM:TMhelix | UniParc:UPI0001A8913F | RefSeq:XP_002437096.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:46486918..46488216
Molecular Weight (calculated)
29019.6 Da
IEP (calculated)
5.597
GRAVY (calculated)
0.177
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKNQVDLE SQKPAPATAD AVVASAAPIT VTALPVSSGG ASSVGRNSGS VVVGVSDGRH VAPETQPLLL AELPNGDSHD DEGLGDDDGG ATSTTGDEAT
101: RLERAMAKAF RSTAELAKHL PTGAVLVFEV LSPVFTNGGK CDDVNRVMTA WLVGLCAAGC FFLCFTDSFH DAKGTVRYVV ATRRGVWVID GTPPPSPEKA
201: AEKRVKFIDF FHAFMSLVVF MSVAMFDRNV GACFNPVMSY DTRQVLTAVP LAGGLVGTLL FATFPSTRHG IGFPVPAA
101: RLERAMAKAF RSTAELAKHL PTGAVLVFEV LSPVFTNGGK CDDVNRVMTA WLVGLCAAGC FFLCFTDSFH DAKGTVRYVV ATRRGVWVID GTPPPSPEKA
201: AEKRVKFIDF FHAFMSLVVF MSVAMFDRNV GACFNPVMSY DTRQVLTAVP LAGGLVGTLL FATFPSTRHG IGFPVPAA
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.