Factsheet for Zm00001d046149_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88463	Sorghum	plastid	85.04	77.7
Os06t0352200-01	Rice	plasma membrane, plastid	74.02	74.31
GSMUA_Achr8P19660_001	Banana	cytosol	40.55	50.49
Zm00001d016492_P001	Maize	cytosol, plasma membrane, vacuole	39.37	47.39
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	37.4	45.02
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	35.83	43.75
Zm00001d009557_P001	Maize	cytosol	40.16	43.22
GSMUA_Achr10P...	Banana	cytosol	37.8	41.2
Zm00001d034995_P001	Maize	plastid	34.65	37.45
Zm00001d007047_P001	Maize	golgi, plasma membrane, vacuole	27.95	37.37
Zm00001d047420_P001	Maize	plasma membrane	25.2	34.04
Zm00001d044822_P001	Maize	plastid	27.17	33.66
Zm00001d044435_P001	Maize	cytosol, plastid, vacuole	29.13	29.37
Zm00001d008235_P001	Maize	golgi, peroxisome, plasma membrane	25.98	29.07
Zm00001d045826_P001	Maize	plasma membrane	20.47	28.73
Zm00001d012217_P001	Maize	plasma membrane	27.95	27.73
Zm00001d044777_P001	Maize	plastid	27.56	27.45
Zm00001d037387_P001	Maize	cytosol	29.53	26.69

Protein Annotations

EMBL:EU974932	EnsemblPlants:Zm00001d046149_P001	EnsemblPlants:Zm00001d046149_T001	EnsemblPlantsGene:Zm00001d046149	EntrezGene:100278708	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF3	PFAM:PF05078
ProteinID:AQL03768.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000182F2E7	UniProt:B6UCG7	MapMan:35.1

Description

DUF679 domain membrane protein 7

Coordinates

chr9:+:67283987..67284751

Molecular Weight (calculated)

26604.7 Da

IEP (calculated)

5.231

GRAVY (calculated)

0.200

Length

254 amino acids

Sequence
(BLAST)

001: MASKNQVDLE SQKPMPTHAV VASAPAASVP ASSGTGSVVA GISDAAPETQ PLLAEPNGHS QEEGLGDGGG TDDETTQLER AMAQAFRSTA ELAKHLPTGA
101: VLAFEVLSPV FTNGGKCDDV NRVMTSWLVG LCAAACFFLC FTDSFHDAKG TVRYAVATRR GLWVIDGTPA PPPVEAAEKR IKFIDFFHAF LSVIVFMSVA
201: MFDGNVGACF NPVMSYDTRQ VLTAVPLAGG LVGTLLFATF PSTRHGIGFP IHAS

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.