Factsheet for GSMUA_Achr10P22360_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19660_001	Banana	cytosol	60.66	62.75
GSMUA_Achr4P02720_001	Banana	plasma membrane	56.4	56.4
GSMUA_Achr4P10580_001	Banana	cytosol	55.45	56.25
TraesCS1D01G403800.1	Wheat	plasma membrane	50.71	48.64
TraesCS1B01G424300.1	Wheat	plasma membrane	50.71	48.64
GSMUA_Achr10P...	Banana	cytosol	53.55	48.5
TraesCS1A01G395800.1	Wheat	plasma membrane	50.71	48.42
Os05t0562800-02	Rice	plastid	52.13	46.22
Zm00001d009557_P001	Maize	cytosol	50.24	44.92
HORVU1Hr1G087380.1	Barley	mitochondrion	52.13	44.9
EES19945	Sorghum	cytosol	50.71	44.77
TraesCS4B01G141000.1	Wheat	plastid	43.13	43.96
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	42.65	43.48
EES05060	Sorghum	cytosol, plasma membrane, vacuole	42.65	43.27
TraesCS4D01G135800.1	Wheat	plastid	42.18	40.64
Zm00001d016492_P001	Maize	cytosol, plasma membrane, vacuole	40.28	40.28
GSMUA_Achr6P08370_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	36.02	39.18
Os06t0352200-01	Rice	plasma membrane, plastid	46.45	38.74
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	39.81	38.53
GSMUA_Achr11P...	Banana	plasma membrane	35.55	38.07
Zm00001d046149_P001	Maize	plastid	45.02	37.4
EER88463	Sorghum	plastid	46.92	35.61
GSMUA_AchrUn_...	Banana	plastid	32.7	35.03
GSMUA_Achr8P32620_001	Banana	plasma membrane	32.7	31.94
GSMUA_Achr10P...	Banana	plastid	29.86	30.14
GSMUA_Achr5P26860_001	Banana	plasma membrane	31.28	14.93

Protein Annotations

EnsemblPlants:GSMUA_Achr10P22360_001	EnsemblPlants:GSMUA_Achr10T22360_001	EnsemblPlantsGene:GSMUA_Achr10G22360_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	TMHMM:TMhelix	UniParc:UPI00029516DD	UniProt:M0RKG1
MapMan:35.1	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G22360_001]

Coordinates

chr10:-:27585291..27585926

Molecular Weight (calculated)

22574.5 Da

IEP (calculated)

8.124

GRAVY (calculated)

0.272

Length

211 amino acids

Sequence
(BLAST)

001: MASIMREEDQ EKQQQPLLTP RGSSSSAEGQ MTSLQKLLGQ TYESTANLAK CLPTGTVLAF QVLSPILADA GHCTKANQVM TACLVALFGL SCFILSFTDS
101: FRDETTGRVR YGVATIKGLW VIDSLKPPSP ELAAKYRLKL IDFMHASVTL LVFAAVALSD KNVASCFYHI GSENSKKLLE ALPAVIGFIA STVCVAFPST
201: RHGIGSPVSA I

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.