Factsheet for TraesCS4A01G176900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G141000.1	Wheat	plastid	98.07	98.07
TraesCS4D01G135800.1	Wheat	plastid	98.55	93.15
EES05060	Sorghum	cytosol, plasma membrane, vacuole	74.88	74.52
Zm00001d016492_P001	Maize	cytosol, plasma membrane, vacuole	72.95	71.56
GSMUA_Achr8P19660_001	Banana	cytosol	46.86	47.55
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	43.48	42.65
TraesCS1A01G395800.1	Wheat	plasma membrane	43.96	41.18
GSMUA_Achr10P...	Banana	cytosol	45.89	40.77
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	40.58	38.53
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	39.13	38.03
TraesCS7A01G324500.1	Wheat	plastid	40.58	37.0
TraesCS6A01G123100.1	Wheat	plastid	37.68	36.28
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	33.33	35.75
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	31.4	34.03
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	34.3	33.65
TraesCS2A01G055600.1	Wheat	plastid	36.23	32.75
TraesCS3A01G407300.1	Wheat	plasma membrane	34.78	32.43
TraesCS2A01G055400.1	Wheat	plastid	36.23	30.99
TraesCS6A01G388200.1	Wheat	plastid	33.82	30.7
TraesCS2A01G055300.1	Wheat	plastid	33.33	30.0
TraesCS6A01G388700.1	Wheat	plastid	34.78	29.75
TraesCS7A01G133600.1	Wheat	plastid	33.33	29.36
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	35.27	28.85
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	28.02	28.16
TraesCS6A01G388800.1	Wheat	plastid	31.4	28.14
TraesCS6A01G388300.1	Wheat	plasma membrane	32.85	27.2
TraesCS6A01G388100.1	Wheat	plastid	29.95	27.07
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	29.47	26.87

Protein Annotations

EnsemblPlants:TraesCS4A01G176900.1	EnsemblPlantsGene:TraesCS4A01G176900	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF9	PFAM:PF05078
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:448258582..448259205

Molecular Weight (calculated)

21737.1 Da

IEP (calculated)

8.116

GRAVY (calculated)

0.251

Length

207 amino acids

Sequence
(BLAST)

001: MSSRPAVDPE SSPAAQQAPL LGNADGRTQT TTVLGKALSS TADLAKHLPT GAVLAFEFLS PTFSADGTCT AANRALTGCL IGACALSCFL LCFTDSYRDE
101: TGTVRYGFVT PSGRLRLIDG AQQMPPRDER YRLRARDVLH GVLSFVVFLA VAMVDSNVVA CFYPVESATT RQLLAAVPMS AGAAGSFLFA MFPSTRRGIG
201: FPVAGTS

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.