Factsheet for TraesCS5A01G470700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

golgi 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, golgi, peroxisome
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G483300.1	Wheat	cytosol, golgi, peroxisome	96.05	95.29
TraesCS6B01G469800.1	Wheat	plastid	78.66	80.57
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	35.97	42.72
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	31.62	41.88
TraesCS6A01G123100.1	Wheat	plastid	34.78	40.93
GSMUA_AchrUn_...	Banana	plastid	30.04	38.58
TraesCS7A01G133600.1	Wheat	plastid	34.39	37.02
AT5G27370.1	Thale cress	plasma membrane	27.27	36.13
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	32.02	35.68
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	28.85	35.27
TraesCS6A01G388200.1	Wheat	plastid	31.62	35.09
TraesCS2A01G055600.1	Wheat	plastid	31.62	34.93
TraesCS2A01G055300.1	Wheat	plastid	31.62	34.78
TraesCS6A01G388700.1	Wheat	plastid	33.2	34.71
TraesCS6A01G388800.1	Wheat	plastid	31.62	34.63
Os01t0368500-00	Rice	golgi, nucleus, plasma membrane	42.69	33.96
TraesCS6A01G388100.1	Wheat	plastid	30.43	33.62
TraesCS2A01G055400.1	Wheat	plastid	32.02	33.47
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	25.3	33.16
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	26.48	31.75
TraesCS7A01G324500.1	Wheat	plastid	28.06	31.28
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	24.51	30.1
TraesCS1A01G395800.1	Wheat	plasma membrane	26.09	29.86
TraesCS6A01G388300.1	Wheat	plasma membrane	28.85	29.2
TraesCS3A01G407300.1	Wheat	plasma membrane	25.3	28.83
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	21.74	25.23

Protein Annotations

EnsemblPlants:TraesCS5A01G470700.1	EnsemblPlantsGene:TraesCS5A01G470700	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF27	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:-:647373987..647374879

Molecular Weight (calculated)

27299.3 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.196

Length

253 amino acids

Sequence
(BLAST)

001: MTGGGNKEKK EEPPKATAIG RGGSSLYDKT LSTASNLARL LPTGTTTAFQ TLAPSFTNHG ECLPVNRYFT WALIFFLGVL CALISFTDSV TDRHGNTRYG
101: FVHPCGFTPF NSGPGGDGTV PIDDRESKRR RMRGRDWLHS VFRFVVFVSL AFCDSGVQKC LVPRESQQWR EFLVNMPLAS GFLASFVFMI FPSSRHGIGA
201: GPGAPAALDD LTDTNADAAV KSDPSKNSKT APAAADTRVA PSTSYDCELH HAV

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.