Factsheet for TraesCS2A01G055400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, extracellular, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G055600.1	Wheat	plastid	92.15	97.38
TraesCS2B01G068500.1	Wheat	plastid	88.84	93.89
TraesCS2D01G054300.1	Wheat	plastid	92.56	92.56
TraesCS6A01G388700.1	Wheat	plastid	85.95	85.95
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	64.05	81.15
TraesCS2A01G055300.1	Wheat	plastid	73.55	77.39
TraesCS6A01G388200.1	Wheat	plastid	71.49	75.88
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	68.59	73.13
TraesCS6A01G388800.1	Wheat	plastid	69.42	72.73
TraesCS6A01G388100.1	Wheat	plastid	68.59	72.49
TraesCS7A01G133600.1	Wheat	plastid	62.81	64.68
OQU76129	Sorghum	plastid	59.92	63.88
KXG19680	Sorghum	plastid	63.22	62.7
Zm00001d044777_P001	Maize	plastid	61.16	58.04
Os01t0389700-01	Rice	plastid	56.61	57.08
TraesCS6A01G388300.1	Wheat	plasma membrane	56.2	54.4
Os01t0389200-01	Rice	cytosol	54.96	50.38
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	44.21	50.23
TraesCS6A01G123100.1	Wheat	plastid	40.91	46.05
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	35.54	41.75
AT5G27370.1	Thale cress	plasma membrane	29.75	37.7
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	30.99	36.23
TraesCS7A01G324500.1	Wheat	plastid	33.47	35.68
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	28.1	35.23
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	30.58	35.07
TraesCS1A01G395800.1	Wheat	plasma membrane	30.17	33.03
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	33.47	32.02
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	26.86	29.82
TraesCS3A01G407300.1	Wheat	plasma membrane	27.27	29.73
GSMUA_Achr5P26860_001	Banana	plasma membrane	40.5	22.17

Protein Annotations

EnsemblPlants:TraesCS2A01G055400.1	EnsemblPlantsGene:TraesCS2A01G055400	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:23828448..23829284

Molecular Weight (calculated)

26418.6 Da

IEP (calculated)

5.650

GRAVY (calculated)

0.062

Length

242 amino acids

Sequence
(BLAST)

001: MASSFSSSSM AVQVHPLTKE DDGEITAAGT APPMTTKGPA PATVMSSVAN LAQLLPTGTV LAYQALSPSF TNHGKCETSN QWLTGMLVAV LASACLFFSF
101: TDSIVGRRDG KLYYGFATPR GFNVFNFSSE EEKQEWHDLD QFRRLRLRPL DFMHAFFAAV VFLTVAFSDV GLQNCFFPDA NRNTEELLKN LPMGMAFLSS
201: FVFIIFPTKR KGIGFSDNAP PQKEICTQLD LTTPLLSGVE GA

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.