Factsheet for TraesCS6A01G388300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G427500.1	Wheat	plasma membrane	82.8	81.82
HORVU6Hr1G090420.1	Barley	cytosol, plasma membrane, plastid, vacuole	80.0	80.32
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	49.6	64.92
TraesCS6A01G388200.1	Wheat	plastid	54.8	60.09
TraesCS2A01G055600.1	Wheat	plastid	54.8	59.83
TraesCS6A01G388800.1	Wheat	plastid	55.2	59.74
TraesCS2A01G055300.1	Wheat	plastid	54.4	59.13
TraesCS6A01G388100.1	Wheat	plastid	52.4	57.21
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	51.2	56.39
TraesCS6A01G388700.1	Wheat	plastid	54.4	56.2
TraesCS2A01G055400.1	Wheat	plastid	54.4	56.2
TraesCS7A01G133600.1	Wheat	plastid	52.0	55.32
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	38.4	45.07
TraesCS6A01G123100.1	Wheat	plastid	36.0	41.86
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	32.4	39.32
AT5G27370.1	Thale cress	plasma membrane	28.8	37.7
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	27.2	35.23
TraesCS7A01G324500.1	Wheat	plastid	31.6	34.8
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	27.2	32.85
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	27.2	32.23
TraesCS1A01G395800.1	Wheat	plasma membrane	28.0	31.67
TraesCS3A01G407300.1	Wheat	plasma membrane	26.4	29.73
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	29.2	28.85
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	24.4	27.98
GSMUA_Achr5P26860_001	Banana	plasma membrane	38.0	21.49

Protein Annotations

EnsemblPlants:TraesCS6A01G388300.1	EnsemblPlantsGene:TraesCS6A01G388300	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:604488302..604489575

Molecular Weight (calculated)

26847.5 Da

IEP (calculated)

8.486

GRAVY (calculated)

0.190

Length

250 amino acids

Sequence
(BLAST)

001: MASSSSSPPR EPARESAPAP ALEPAEPPVP APPAEPAPVP VGLPAPQRAA EAAALPPAVP APKWVMPSVS NLAQLLPTGT VLAYEALSPT FTNHGNCNIA
101: NKVLTGVMIL VLAIMCVFFS FTDSIVGSHD GKLYYGVATW HGFNVFNFSD DQKRQEWTVL DFKKLRLRWL DIVQAIFTAV VFLTVAFSDV GLQNCFFPKP
201: GGNTQQVLKI LPLGMTIVSS FVFTIFPTKR KGIGFNDITP RQTASQSNAV

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.