Factsheet for TraesCS2A01G153900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G159400.1	Wheat	peroxisome	98.12	98.12
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	95.31	89.43
HORVU1Hr1G067430.1	Barley	mitochondrion	91.08	85.46
HORVU2Hr1G027720.1	Barley	mitochondrion, plastid	78.4	73.57
TraesCS6A01G123100.1	Wheat	plastid	74.18	73.49
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	74.65	70.67
KXG32269	Sorghum	cytosol, peroxisome, plasma membrane	72.3	66.67
Zm00001d008235_P001	Maize	golgi, peroxisome, plasma membrane	70.42	66.08
GSMUA_AchrUn_...	Banana	plastid	51.17	55.33
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	48.36	53.93
TraesCS7A01G133600.1	Wheat	plastid	51.64	46.81
TraesCS2A01G055600.1	Wheat	plastid	50.23	46.72
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	49.77	46.7
TraesCS6A01G388200.1	Wheat	plastid	49.77	46.49
TraesCS6A01G388800.1	Wheat	plastid	49.77	45.89
TraesCS6A01G388100.1	Wheat	plastid	49.3	45.85
TraesCS6A01G388700.1	Wheat	plastid	50.7	44.63
TraesCS2A01G055400.1	Wheat	plastid	50.23	44.21
TraesCS2A01G055300.1	Wheat	plastid	47.42	43.91
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	38.5	39.81
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	35.68	39.38
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	38.03	39.13
TraesCS6A01G388300.1	Wheat	plasma membrane	45.07	38.4
AT5G27370.1	Thale cress	plasma membrane	32.39	36.13
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	42.72	35.97
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	34.74	35.07
TraesCS7A01G324500.1	Wheat	plastid	37.09	34.8
TraesCS1A01G395800.1	Wheat	plasma membrane	34.74	33.48
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	32.39	31.65
TraesCS3A01G407300.1	Wheat	plasma membrane	30.52	29.28

Protein Annotations

EnsemblPlants:TraesCS2A01G153900.1	EnsemblPlantsGene:TraesCS2A01G153900	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF2	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2A:+:101836320..101837267

Molecular Weight (calculated)

22627.3 Da

IEP (calculated)

6.615

GRAVY (calculated)

0.372

Length

213 amino acids

Sequence
(BLAST)

001: MDSGAIHVQM PVTGEECPPQ EAKPVKGKSP VDKTLSGASD LLKLLPTGTV LAFQALAPSF TNHGVCHTAN RYLVLALIGG CALSCVLLSF TDSLVGRDGK
101: LYYGIATFRS FYPFNFAGAA AEQDAMFSDL GRFRLTGLDF VHAVFSAVVF LAVAFSDAGI QSCLFPDAGA DVRELLVNLP LGAGFLSSVV FMIFPTTRKS
201: VGYTDMTPHS HSH

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.