Factsheet for Zm00001d008235_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32269	Sorghum	cytosol, peroxisome, plasma membrane	83.26	81.82
HORVU6Hr1G022610.1	Barley	plasma membrane	70.48	75.47
TraesCS6A01G123100.1	Wheat	plastid	70.48	74.42
TraesCS6D01G113300.1	Wheat	plastid	70.04	73.95
TraesCS6D01G113400.1	Wheat	plastid	69.16	73.36
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	69.16	72.69
TraesCS2D01G159400.1	Wheat	peroxisome	67.4	71.83
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	66.08	70.42
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	69.16	69.78
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	66.52	66.52
HORVU1Hr1G067430.1	Barley	mitochondrion	64.32	64.32
Zm00001d045826_P001	Maize	plasma membrane	46.7	58.56
HORVU2Hr1G027720.1	Barley	mitochondrion, plastid	57.27	57.27
GSMUA_AchrUn_...	Banana	plastid	44.49	51.27
Zm00001d044435_P001	Maize	cytosol, plastid, vacuole	46.7	42.06
Zm00001d044777_P001	Maize	plastid	45.81	40.78
Zm00001d047420_P001	Maize	plasma membrane	31.72	38.3
AT5G27370.1	Thale cress	plasma membrane	32.16	38.22
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	33.48	36.54
Zm00001d016492_P001	Maize	cytosol, plasma membrane, vacuole	33.92	36.49
Zm00001d007047_P001	Maize	golgi, plasma membrane, vacuole	30.4	36.32
Zm00001d044822_P001	Maize	plastid	30.84	34.15
Zm00001d034995_P001	Maize	plastid	33.92	32.77
Zm00001d009557_P001	Maize	cytosol	33.48	32.2
Zm00001d037387_P001	Maize	cytosol	34.8	28.11
Zm00001d046149_P001	Maize	plastid	29.07	25.98
Zm00001d012217_P001	Maize	plasma membrane	26.43	23.44

Protein Annotations

EnsemblPlants:Zm00001d008235_P001	EnsemblPlants:Zm00001d008235_T001	EnsemblPlantsGene:Zm00001d008235	EntrezGene:103636687	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF2	PFAM:PF05078	ProteinID:AQK89250.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002213EBD	UniProt:K7UST2	MapMan:35.1	:

Description

DUF679 domain membrane protein 7

Coordinates

chr8:+:2109803..2110486

Molecular Weight (calculated)

24408.3 Da

IEP (calculated)

5.569

GRAVY (calculated)

0.139

Length

227 amino acids

Sequence
(BLAST)

001: MDPNGVRIQM LTAGQDVEPP SVQDDATKKK PQQTDDAATP KAPPARPALS SASDLMKLLP TGTVLAFQAL APSFSNHGVC HAANRYLVLS LIGACAVSCV
101: LLSFTDSLVG RDGKLYHGAA TFWGFYPFNY TGTREQREAA FDDEDLSRFR VTALDFVHAF FSALVFLAVA LADASIQGCL FPDAGPDVRE LLVNLPLGAG
201: FLSSMVFMIF PTTRKSIGYM DMAPHAQ

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.