Factsheet for Os01t0388700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G159400.1	Wheat	peroxisome	71.11	75.12
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	70.67	74.65
KXG32269	Sorghum	cytosol, peroxisome, plasma membrane	72.44	70.56
Zm00001d008235_P001	Maize	golgi, peroxisome, plasma membrane	69.78	69.16
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	69.78	69.16
HORVU1Hr1G067430.1	Barley	mitochondrion	67.11	66.52
HORVU2Hr1G027720.1	Barley	mitochondrion, plastid	57.78	57.27
Os01t0368700-01	Rice	cytosol, plasma membrane	56.0	56.0
GSMUA_AchrUn_...	Banana	plastid	48.89	55.84
Os07t0407900-01	Rice	cytosol, peroxisome, plasma membrane	50.22	43.13
Os01t0389700-01	Rice	plastid	44.44	41.67
Os03t0370400-01	Rice	plastid	35.56	41.45
Os07t0645300-01	Rice	plasma membrane, vacuole	32.0	38.3
Os08t0106501-01	Rice	plastid	37.78	37.95
AT5G27370.1	Thale cress	plasma membrane	31.56	37.17
Os01t0389200-01	Rice	cytosol	42.67	36.36
Os01t0368500-00	Rice	golgi, nucleus, plasma membrane	48.89	34.59
Os05t0562800-02	Rice	plastid	35.11	33.19
Os06t0352200-01	Rice	plasma membrane, plastid	31.11	27.67
Os01t0882400-01	Rice	cytosol, peroxisome	29.33	27.62

Protein Annotations

MapMan:35.1	EntrezGene:4325226	ProteinID:BAC57885.1	ProteinID:BAF05020.1	ProteinID:BAS72271.1	InterPro:DMP
ProteinID:EAZ12011.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005783	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0010256	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	EnsemblPlantsGene:Os01g0388700	EnsemblPlants:Os01t0388700-01	PFAM:PF05078	PANTHER:PTHR31621
PANTHER:PTHR31621:SF2	UniProt:Q84SB1	TMHMM:TMhelix	UniParc:UPI0000004816	RefSeq:XP_015643606.1	SEG:seg

Description

Protein of unknown function DUF679 family protein. (Os01t0388700-01)

Coordinates

chr1:-:16392304..16393382

Molecular Weight (calculated)

24301.3 Da

IEP (calculated)

6.067

GRAVY (calculated)

0.303

Length

225 amino acids

Sequence
(BLAST)

001: MDPNAVHVQM PAVDTEACCD DEKNPQPARE IISDHVAVRP TPAVDKTLSG ASDLLKLLPT GTVLAFQALA PSFSNHGVCH AVANRYLVLA LIGACAASCM
101: LLSFTDSLIG HDGKLYYGVA TLRGFRPFNF AGTREEHGTV FKDLSRFRIT ALDFVHAFFS AVVFLAVAFA DAAVQTCLFP EAEADMRELL VNLPLGAGFL
201: SSMVFMIFPT TRKSIGYTDM TPHSQ

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.