Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 2
- golgi 2
- extracellular 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 77.72 | 89.82 |
| TraesCS7A01G438100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 89.64 | 89.64 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 89.64 | 89.64 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 88.6 | 88.6 |
| EER94799 | Sorghum | plasma membrane | 86.53 | 86.53 |
| Zm00001d047420_P001 | Maize | plasma membrane | 81.35 | 83.51 |
| GSMUA_Achr6P08370_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 56.99 | 56.7 |
| VIT_05s0020g02280.t01 | Wine grape | plastid | 51.81 | 52.08 |
| Os07t0645300-01 | Rice | plasma membrane, vacuole | 47.67 | 48.94 |
| Bra023874.1-P | Field mustard | plasma membrane | 46.11 | 48.11 |
| Bra031289.1-P | Field mustard | plasma membrane | 46.11 | 48.11 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 46.11 | 48.11 |
| CDY37280 | Canola | plasma membrane | 46.11 | 48.11 |
| CDY38623 | Canola | plasma membrane | 46.11 | 48.11 |
| CDY44328 | Canola | plasma membrane | 46.11 | 48.11 |
| PGSC0003DMT400081771 | Potato | extracellular | 43.01 | 47.7 |
| KRH20960 | Soybean | plastid | 50.26 | 47.55 |
| AT3G21550.1 | Thale cress | plasma membrane | 45.08 | 47.28 |
| Solyc01g080490.2.1 | Tomato | extracellular | 42.49 | 47.13 |
| KRH50953 | Soybean | plastid | 48.7 | 42.73 |
| KRH02164 | Soybean | endoplasmic reticulum | 46.11 | 42.58 |
| KRH50952 | Soybean | plasma membrane, plastid | 48.19 | 41.89 |
| Os08t0106501-01 | Rice | plastid | 42.49 | 36.61 |
| Os01t0368700-01 | Rice | cytosol, plasma membrane | 41.97 | 36.0 |
| Os01t0388700-01 | Rice | cytosol, peroxisome, plasma membrane | 41.45 | 35.56 |
| Os05t0562800-02 | Rice | plastid | 38.86 | 31.51 |
| Os07t0407900-01 | Rice | cytosol, peroxisome, plasma membrane | 40.93 | 30.15 |
| Os01t0389700-01 | Rice | plastid | 36.79 | 29.58 |
| Os01t0882400-01 | Rice | cytosol, peroxisome | 35.75 | 28.87 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 37.82 | 28.85 |
| Os01t0389200-01 | Rice | cytosol | 32.64 | 23.86 |
| Os01t0368500-00 | Rice | golgi, nucleus, plasma membrane | 37.82 | 22.96 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4332934 | ProteinID:AAG46134.1 | ProteinID:ABF96173.1 | EMBL:AK060059 | ProteinID:BAF12112.1 |
| ProteinID:BAS84361.1 | InterPro:DMP | ProteinID:EAZ27070.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 |
| GO:GO:0010256 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | EnsemblPlantsGene:Os03g0370400 | EnsemblPlants:Os03t0370400-01 |
| PFAM:PF05078 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF26 | UniProt:Q10KU0 | TMHMM:TMhelix | UniParc:UPI00000A4D1B |
| RefSeq:XP_015628986.1 | SEG:seg | : | : | : | : |
Description
Protein of unknown function DUF679 family protein. (Os03t0370400-01)
Coordinates
chr3:+:14543805..14544754
Molecular Weight (calculated)
20482.6 Da
IEP (calculated)
7.500
GRAVY (calculated)
0.413
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPARSVS VADRALRGVA DLIKLLPSGT VFLFQFLSPL VTNNGHCAAA YSRVLSAALL ALCGAFCAFS SFTDSYVGSD GRVYYGVVTA RGLRTFAADP
101: DAAARDLSGY RLRAGDFVHA ALSLLVFATI ALLDADTVAC LYPALEVSER TMMAVLPPVV GGVASYAFMV FPNNRHGIGY QPTRATEDFE HKH
101: DAAARDLSGY RLRAGDFVHA ALSLLVFATI ALLDADTVAC LYPALEVSER TMMAVLPPVV GGVASYAFMV FPNNRHGIGY QPTRATEDFE HKH
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.