Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38623 | Canola | plasma membrane | 98.38 | 98.38 |
| CDY37280 | Canola | plasma membrane | 92.43 | 92.43 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 91.89 | 91.89 |
| AT3G21550.1 | Thale cress | plasma membrane | 90.27 | 90.76 |
| VIT_05s0020g02280.t01 | Wine grape | plastid | 66.49 | 64.06 |
| PGSC0003DMT400081771 | Potato | extracellular | 57.84 | 61.49 |
| Solyc01g080490.2.1 | Tomato | extracellular | 56.76 | 60.34 |
| GSMUA_Achr11P... | Banana | plasma membrane | 61.08 | 57.36 |
| KRH20960 | Soybean | plastid | 56.22 | 50.98 |
| Zm00001d047420_P001 | Maize | plasma membrane | 48.65 | 47.87 |
| EER94799 | Sorghum | plasma membrane | 48.65 | 46.63 |
| Os03t0370400-01 | Rice | plastid | 48.11 | 46.11 |
| TraesCS7A01G438100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 47.57 | 45.6 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 47.57 | 45.6 |
| KRH50953 | Soybean | plastid | 53.51 | 45.0 |
| KRH02164 | Soybean | endoplasmic reticulum | 50.81 | 44.98 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 46.49 | 44.56 |
| KRH50952 | Soybean | plasma membrane, plastid | 51.89 | 43.24 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 45.95 | 42.08 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 37.84 | 41.92 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 44.86 | 41.09 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.32 | 40.2 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 40.0 | 37.0 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 39.46 | 36.5 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 38.92 | 36.0 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 38.92 | 36.0 |
| CDY03457 | Canola | plastid | 41.08 | 35.19 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 40.54 | 35.05 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 40.54 | 35.05 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 40.54 | 35.05 |
| CDY33452 | Canola | plasma membrane | 40.54 | 34.56 |
| CDY34278 | Canola | plasma membrane, plastid | 41.08 | 34.55 |
| CDX77630 | Canola | plasma membrane | 40.0 | 34.1 |
| CDY34571 | Canola | plasma membrane | 39.46 | 33.64 |
| CDY08933 | Canola | plasma membrane | 40.0 | 33.48 |
| CDY24837 | Canola | plasma membrane, plastid | 39.46 | 33.33 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 8.11 | 33.33 |
| CDY60883 | Canola | cytosol | 40.0 | 33.04 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 39.46 | 32.59 |
| CDY34728 | Canola | plasma membrane, plastid | 38.38 | 32.13 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 37.3 | 28.63 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 37.3 | 28.63 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 22.7 | 26.25 |
| CDX74441 | Canola | plastid | 31.35 | 23.77 |
| CDX81135 | Canola | plastid | 30.27 | 23.14 |
| CDY56548 | Canola | plastid | 29.73 | 22.73 |
| CDY38243 | Canola | cytosol | 16.22 | 22.06 |
| CDY30259 | Canola | plastid | 14.59 | 20.3 |
Protein Annotations
| EnsemblPlants:CDY44328 | EnsemblPlantsGene:GSBRNA2T00079971001 | GO:A0A078I592 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF1 | PFAM:PF05078 | ProteinID:CDY44328 | ProteinID:CDY44328.1 |
| TMHMM:TMhelix | UniParc:UPI0004EF312E | UniProt:A0A078I592 | MapMan:35.1 | : | : |
Description
BnaC05g30650DBnaC05g30650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I592]
Coordinates
chrLK032586:+:138056..138796
Molecular Weight (calculated)
20384.6 Da
IEP (calculated)
7.806
GRAVY (calculated)
0.280
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTFKAIRD RTYSGVGDLI RLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGALIVICA FSCCFTCFTD SYRTSDGYVH YGVATVKGLW PDSSSKDLSS
101: YRLRVGDFVH AFFSLIVFSV ISLLDSNTVN CFYPGFGSNG KIFLMVLPPV IGVISGTVFT VFPTRRHGIG NPSENNDENA SEMEK
101: YRLRVGDFVH AFFSLIVFSV ISLLDSNTVN CFYPGFGSNG KIFLMVLPPV IGVISGTVFT VFPTRRHGIG NPSENNDENA SEMEK
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.