Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34571 | Canola | plasma membrane | 99.08 | 99.08 |
| Bra025039.1-P | Field mustard | plasma membrane | 98.16 | 98.16 |
| CDY33452 | Canola | plasma membrane | 97.7 | 97.7 |
| AT5G46090.1 | Thale cress | plasma membrane | 68.66 | 69.63 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 64.06 | 64.95 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 64.06 | 64.95 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 64.06 | 64.95 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 70.05 | 63.07 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 69.59 | 62.66 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 64.06 | 62.05 |
| CDY60883 | Canola | cytosol | 64.06 | 62.05 |
| PGSC0003DMT400081227 | Potato | plasma membrane | 58.99 | 61.24 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 56.22 | 58.37 |
| CDY38243 | Canola | cytosol | 35.02 | 55.88 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 53.92 | 55.45 |
| KRH21356 | Soybean | cytosol, peroxisome, plasma membrane | 53.0 | 54.5 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 52.07 | 54.33 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 52.07 | 53.55 |
| KRH20387 | Soybean | plasma membrane | 51.15 | 51.15 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 55.76 | 49.39 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 45.62 | 47.6 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 43.32 | 47.0 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 42.86 | 46.5 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 42.86 | 46.5 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 42.4 | 46.0 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 42.86 | 44.71 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.25 | 44.38 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 49.31 | 43.67 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.86 | 43.46 |
| Os05t0562800-02 | Rice | plastid | 47.0 | 42.86 |
| KRH50120 | Soybean | peroxisome | 40.09 | 41.83 |
| TraesCS3A01G245800.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.47 | 41.28 |
| CDY37280 | Canola | plasma membrane | 34.1 | 40.0 |
| CDY44328 | Canola | plasma membrane | 34.1 | 40.0 |
| CDY38623 | Canola | plasma membrane | 33.18 | 38.92 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 33.18 | 38.92 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 44.7 | 38.34 |
| CDY34728 | Canola | plasma membrane, plastid | 38.71 | 38.01 |
| CDY24837 | Canola | plasma membrane, plastid | 38.25 | 37.9 |
| CDY08933 | Canola | plasma membrane | 37.33 | 36.65 |
| CDY03457 | Canola | plastid | 34.1 | 34.26 |
| CDY34278 | Canola | plasma membrane, plastid | 34.1 | 33.64 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 29.49 | 31.68 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 28.11 | 30.2 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.11 | 29.9 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 21.2 | 28.75 |
| CDY30259 | Canola | plastid | 16.59 | 27.07 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 5.53 | 26.67 |
| CDX74441 | Canola | plastid | 29.95 | 26.64 |
| CDX81135 | Canola | plastid | 29.03 | 26.03 |
| CDY56548 | Canola | plastid | 28.57 | 25.62 |
Protein Annotations
| EnsemblPlants:CDX77630 | EnsemblPlantsGene:GSBRNA2T00128557001 | GO:A0A078CL67 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF0 |
| PFAM:PF05078 | ProteinID:CDX77630 | ProteinID:CDX77630.1 | TMHMM:TMhelix | UniParc:UPI0004EF2F5E | MapMan:35.1 |
Description
BnaC07g18840D
Coordinates
chrLK031812:+:235754..236407
Molecular Weight (calculated)
23805.9 Da
IEP (calculated)
6.854
GRAVY (calculated)
0.245
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: METKVDEEAG VNGAGGAIKE EKAPLLKAQE FPEVERNNWI HKAIGQTFKT TAHLANHLPT GTALAYQVLS PVLTNGGRCD FASRYMTEML VSICAFTCFI
101: LSFSDSYRDL NGTVCYGFAM TNGLWIIDGK AVLPKERSKS YRLQFIDFAH AFMTLLVFGA VVMFDHNVVN CFFPKPSAEV AELLSALPVA IGVFCSMMFA
201: TFPTTRHGIG FPLSAHC
101: LSFSDSYRDL NGTVCYGFAM TNGLWIIDGK AVLPKERSKS YRLQFIDFAH AFMTLLVFGA VVMFDHNVVN CFFPKPSAEV AELLSALPVA IGVFCSMMFA
201: TFPTTRHGIG FPLSAHC
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.