Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023875.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 100.0 | 100.0 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 98.02 | 98.02 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 90.1 | 87.92 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 88.61 | 87.75 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 16.83 | 75.56 |
| CDY37280 | Canola | plasma membrane | 43.07 | 47.03 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 43.07 | 47.03 |
| CDY38623 | Canola | plasma membrane | 42.08 | 45.95 |
| CDY44328 | Canola | plasma membrane | 41.09 | 44.86 |
| Zm00001d007047_P001 | Maize | golgi, plasma membrane, vacuole | 41.58 | 44.21 |
| Os07t0645300-01 | Rice | plasma membrane, vacuole | 41.09 | 44.15 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 23.27 | 43.12 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 43.56 | 41.71 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 43.56 | 41.31 |
| TraesCS2A01G141700.1 | Wheat | cytosol, peroxisome, vacuole | 43.07 | 41.23 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 42.08 | 40.09 |
| EER97642 | Sorghum | peroxisome | 43.07 | 39.37 |
| CDY03457 | Canola | plastid | 37.13 | 34.72 |
| CDY24837 | Canola | plasma membrane, plastid | 37.62 | 34.7 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 36.63 | 34.58 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 36.63 | 34.58 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 36.63 | 34.58 |
| CDY34278 | Canola | plasma membrane, plastid | 37.62 | 34.55 |
| CDY08933 | Canola | plasma membrane | 37.13 | 33.94 |
| CDY34728 | Canola | plasma membrane, plastid | 36.14 | 33.03 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 32.67 | 33.0 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 32.67 | 33.0 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 36.14 | 32.59 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 32.18 | 32.5 |
| CDY60883 | Canola | cytosol | 35.64 | 32.14 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 31.68 | 32.0 |
| CDY33452 | Canola | plasma membrane | 33.17 | 30.88 |
| CDY34571 | Canola | plasma membrane | 32.18 | 29.95 |
| CDX77630 | Canola | plasma membrane | 31.68 | 29.49 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 22.28 | 28.12 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 32.67 | 27.39 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 32.18 | 26.97 |
| CDX74441 | Canola | plastid | 31.68 | 26.23 |
| CDX81135 | Canola | plastid | 30.69 | 25.62 |
| CDY56548 | Canola | plastid | 30.2 | 25.21 |
| CDY30259 | Canola | plastid | 14.36 | 21.8 |
| CDY38243 | Canola | cytosol | 13.37 | 19.85 |
Protein Annotations
| EnsemblPlants:CDY37281 | EnsemblPlantsGene:GSBRNA2T00063795001 | GO:A0A078HHQ7 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF1 | PFAM:PF05078 | ProteinID:CDY37281 | ProteinID:CDY37281.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000254453F | UniProt:A0A078HHQ7 | MapMan:35.1 | : |
Description
BnaA01g25010DBnaA01g25010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHQ7]
Coordinates
chrLK032397:-:47633..48241
Molecular Weight (calculated)
21574.2 Da
IEP (calculated)
8.462
GRAVY (calculated)
0.304
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEASSLLIP KTNSPVSSKL MANKSLTGLE SLIKLLPTGT LFIYLLLNPV LTNDGECSTA NKVMSSILVA LCSFSCVFSC FTDSFKGTDG SRKYGIVTKT
101: GLWTYADPGS VDLSKYKLRI ADFVHAVFVV AVFGTLVLLD ANTASCFYPR FRETQKTLIM ALPPAVGVAS AAIFAIFPSK RNGIGYAPVG EEEETKKGSD
201: SA
101: GLWTYADPGS VDLSKYKLRI ADFVHAVFVV AVFGTLVLLD ANTASCFYPR FRETQKTLIM ALPPAVGVAS AAIFAIFPSK RNGIGYAPVG EEEETKKGSD
201: SA
001: MSETSLLIPK TNSPASSENM ANTNKSLTGL ESLIKLLPTG TLFIYLLLNP VLTNDGECST GNKVMSSILV ALCSFSCVFS CFTDSFKGVD GSRKFGIVTK
101: KGLWTYAEPG SVDLSKYKLR IADFVHAGFV LAVFGTLVLL DANTASCFYP RFRETQKTLV MALPPAVGVA SATIFALFPS KRSGIGYAPI AEEVGAEEET
201: KKASVSA
101: KGLWTYAEPG SVDLSKYKLR IADFVHAGFV LAVFGTLVLL DANTASCFYP RFRETQKTLV MALPPAVGVA SATIFALFPS KRSGIGYAPI AEEVGAEEET
201: KKASVSA
Arabidopsis Description
DMP1Protein DMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVF4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.