Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- golgi 1
- plasma membrane 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 22.06 | 100.0 |
| Bra031287.1-P | Field mustard | plasma membrane | 97.06 | 97.06 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 87.75 | 88.61 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 86.76 | 87.62 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 84.8 | 83.57 |
| CDY37280 | Canola | plasma membrane | 42.16 | 46.49 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 41.67 | 45.95 |
| CDY38623 | Canola | plasma membrane | 41.18 | 45.41 |
| CDY44328 | Canola | plasma membrane | 40.2 | 44.32 |
| Zm00001d007047_P001 | Maize | golgi, plasma membrane, vacuole | 41.18 | 44.21 |
| Os07t0645300-01 | Rice | plasma membrane, vacuole | 40.69 | 44.15 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 23.53 | 44.04 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 43.63 | 42.18 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 43.63 | 41.78 |
| TraesCS2A01G141700.1 | Wheat | cytosol, peroxisome, vacuole | 43.14 | 41.71 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 42.65 | 41.04 |
| EER97642 | Sorghum | peroxisome | 42.65 | 39.37 |
| CDY03457 | Canola | plastid | 37.25 | 35.19 |
| CDY24837 | Canola | plasma membrane, plastid | 37.75 | 35.16 |
| CDY34278 | Canola | plasma membrane, plastid | 37.75 | 35.0 |
| CDY08933 | Canola | plasma membrane | 36.76 | 33.94 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 34.8 | 33.18 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 34.8 | 33.18 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 34.8 | 33.18 |
| CDY34728 | Canola | plasma membrane, plastid | 35.78 | 33.03 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 31.37 | 32.0 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 34.8 | 31.7 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 30.88 | 31.5 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.88 | 31.5 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.88 | 31.5 |
| CDY60883 | Canola | cytosol | 34.31 | 31.25 |
| CDY33452 | Canola | plasma membrane | 31.37 | 29.49 |
| CDY34571 | Canola | plasma membrane | 30.39 | 28.57 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 22.06 | 28.12 |
| CDX77630 | Canola | plasma membrane | 29.9 | 28.11 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 30.88 | 26.14 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 30.39 | 25.73 |
| CDX74441 | Canola | plastid | 29.9 | 25.0 |
| CDY56548 | Canola | plastid | 28.92 | 24.38 |
| CDX81135 | Canola | plastid | 28.92 | 24.38 |
| CDY30259 | Canola | plastid | 14.22 | 21.8 |
| CDY38243 | Canola | cytosol | 12.25 | 18.38 |
Protein Annotations
| EnsemblPlants:CDY38622 | EnsemblPlantsGene:GSBRNA2T00066315001 | GO:A0A078HL72 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF1 | PFAM:PF05078 | ProteinID:CDY38622 | ProteinID:CDY38622.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE728E | UniProt:A0A078HL72 | MapMan:35.1 | : |
Description
BnaA05g19650DBnaA05g19650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HL72]
Coordinates
chrLK032428:+:67027..67641
Molecular Weight (calculated)
21805.5 Da
IEP (calculated)
8.187
GRAVY (calculated)
0.259
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEASSLLIP KTNPLVTSEP MANKSLTGLE SLIKLLPTGT LFIYLLLNPV LTNDGECSTS NKVISSILIA LCSFSCVISC FTDSFKGTDG SRKYGIVTRK
101: GLWTYADPGS VDLSKYKLRI ADFVHAGFVV AVFGALVLLD ANTASCFYPR FRETQKTLVM VLPVAVGIAS AGIFAIFPSK RNGLGYAPSG EKEEEETKKD
201: AGSA
101: GLWTYADPGS VDLSKYKLRI ADFVHAGFVV AVFGALVLLD ANTASCFYPR FRETQKTLVM VLPVAVGIAS AGIFAIFPSK RNGLGYAPSG EKEEEETKKD
201: AGSA
001: MSETSLLIPK TNSPASSENM ANTNKSLTGL ESLIKLLPTG TLFIYLLLNP VLTNDGECST GNKVMSSILV ALCSFSCVFS CFTDSFKGVD GSRKFGIVTK
101: KGLWTYAEPG SVDLSKYKLR IADFVHAGFV LAVFGTLVLL DANTASCFYP RFRETQKTLV MALPPAVGVA SATIFALFPS KRSGIGYAPI AEEVGAEEET
201: KKASVSA
101: KGLWTYAEPG SVDLSKYKLR IADFVHAGFV LAVFGTLVLL DANTASCFYP RFRETQKTLV MALPPAVGVA SATIFALFPS KRSGIGYAPI AEEVGAEEET
201: KKASVSA
Arabidopsis Description
DMP1Protein DMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVF4]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.