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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77630 Canola plasma membrane 99.08 99.08
CDY33452 Canola plasma membrane 98.62 98.62
Bra025039.1-P Field mustard plasma membrane 98.16 98.16
AT5G46090.1 Thale cress plasma membrane 68.66 69.63
CDX76523 Canola cytosol, peroxisome, plasma membrane 64.06 64.95
CDX76524 Canola cytosol, peroxisome, plasma membrane 64.06 64.95
CDY55785 Canola cytosol, peroxisome, plasma membrane 64.06 64.95
CDX77629 Canola cytosol, peroxisome, plasma membrane 70.51 63.49
CDY70034 Canola cytosol, peroxisome, plasma membrane 70.05 63.07
CDX78854 Canola cytosol, peroxisome, plasma membrane 64.06 62.05
CDY60883 Canola cytosol 64.06 62.05
PGSC0003DMT400081227 Potato plasma membrane 58.99 61.24
Solyc02g077640.1.1 Tomato plasma membrane 57.14 59.33
CDY38243 Canola cytosol 35.02 55.88
VIT_13s0106g00720.t01 Wine grape plasma membrane 53.92 55.45
GSMUA_Achr4P10580_001 Banana cytosol 53.0 55.29
GSMUA_Achr4P02720_001 Banana plasma membrane 53.0 54.5
KRH21356 Soybean cytosol, peroxisome, plasma membrane 53.0 54.5
KRH20387 Soybean plasma membrane 52.07 52.07
VIT_10s0003g00320.t01 Wine grape plasma membrane 55.76 49.39
KXG33079 Sorghum cytosol, endoplasmic reticulum, plasma membrane 46.54 48.56
CDY29909 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 43.78 47.5
CDY38387 Canola cytosol, endoplasmic reticulum, plasma membrane 43.32 47.0
CDX92877 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 43.32 47.0
CDY35189 Canola cytosol, endoplasmic reticulum, plasma membrane 42.86 46.5
Zm00001d011558_P001 Maize cytosol, endoplasmic reticulum, peroxisome 43.78 45.67
TraesCS3B01G273700.1 Wheat cytosol, peroxisome, plasma membrane 39.17 45.45
HORVU1Hr1G087380.1 Barley mitochondrion 50.23 44.49
TraesCS3D01G245600.1 Wheat cytosol, peroxisome, plasma membrane 43.78 44.39
Os05t0562800-02 Rice plastid 47.93 43.7
TraesCS3A01G245800.1 Wheat cytosol, peroxisome, plasma membrane 42.4 42.2
KRH50120 Soybean peroxisome 40.09 41.83
CDY37280 Canola plasma membrane 33.64 39.46
CDY44328 Canola plasma membrane 33.64 39.46
Os06t0352200-01 Rice plasma membrane, plastid 45.16 38.74
CDY38623 Canola plasma membrane 32.72 38.38
CDY19288 Canola extracellular, plasma membrane, vacuole 32.72 38.38
CDY24837 Canola plasma membrane, plastid 38.71 38.36
CDY34728 Canola plasma membrane, plastid 38.71 38.01
CDY08933 Canola plasma membrane 37.79 37.1
CDY03457 Canola plastid 34.56 34.72
CDY34278 Canola plasma membrane, plastid 34.56 34.09
CDY37281 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 29.95 32.18
CDY19287 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 28.57 30.69
CDY38622 Canola endoplasmic reticulum, plasma membrane, vacuole 28.57 30.39
CDY34726 Canola cytosol, extracellular, peroxisome 21.2 28.75
CDY30259 Canola plastid 16.59 27.07
CDY44329 Canola endoplasmic reticulum, extracellular, vacuole 5.53 26.67
CDX74441 Canola plastid 29.95 26.64
CDX81135 Canola plastid 29.03 26.03
CDY56548 Canola plastid 28.57 25.62
Protein Annotations
EnsemblPlants:CDY34571EnsemblPlantsGene:GSBRNA2T00057004001GO:A0A078HA41GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DMPPANTHER:PTHR31621PANTHER:PTHR31621:SF0PFAM:PF05078ProteinID:CDY34571ProteinID:CDY34571.1
TMHMM:TMhelixUniParc:UPI0004EE9691UniProt:A0A078HA41MapMan:35.1::
Description
BnaC03g56710DBnaC03g56710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HA41]
Coordinates
chrLK032337:-:196359..197012
Molecular Weight (calculated)
23792.9 Da
IEP (calculated)
6.854
GRAVY (calculated)
0.258
Length
217 amino acids
Sequence
(BLAST)
001: METKVDEEAG VNGAGGAIKE EKAPLLKAQE FPEVERNNWI HKAIGQTFKT TAHLANHLPT GTALAYQVLS PVLTNGGRCD FASRYMTEML VSICAFTCFI
101: LSFSDSYRDL NGTVCYGFAM TNGLWIIDGK AVLPKERSKS YRLQFIDFAH AFMTLLVFGA VVMFDHNVVS CFFPKPSAEV AELLTALPVA IGVFCSMMFA
201: TFPTTRHGIG FPLSAHC
Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.