CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025657.1-P	Field mustard	plastid	99.18	99.18
CDY30259	Canola	plastid	51.64	94.74
CDX81135	Canola	plastid	89.75	90.5
CDY56548	Canola	plastid	89.34	90.08
AT1G09157.1	Thale cress	plastid	89.34	89.71
VIT_14s0108g00920.t01	Wine grape	plastid	61.07	69.63
KRG98790	Soybean	plasma membrane	58.61	66.82
KRG98781	Soybean	plasma membrane	58.2	66.36
Solyc05g007920.2.1	Tomato	cytosol	56.97	61.78
GSMUA_Achr10P...	Banana	plastid	52.87	61.72
PGSC0003DMT400090619	Potato	cytosol	56.15	60.09
Zm00001d044822_P001	Maize	plastid	50.41	60.0
EER89477	Sorghum	plastid	50.0	57.55
CDY38387	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.92	36.5
CDY35189	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.51	36.0
CDY29909	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	28.69	35.0
CDX92877	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	28.69	35.0
CDY24837	Canola	plasma membrane, plastid	31.15	34.7
CDX76524	Canola	cytosol, peroxisome, plasma membrane	30.33	34.58
CDX76523	Canola	cytosol, peroxisome, plasma membrane	29.92	34.11
CDY55785	Canola	cytosol, peroxisome, plasma membrane	29.92	34.11
CDY34728	Canola	plasma membrane, plastid	30.74	33.94
CDY03457	Canola	plastid	29.92	33.8
CDY34278	Canola	plasma membrane, plastid	30.33	33.64
CDY08933	Canola	plasma membrane	30.33	33.48
CDX78854	Canola	cytosol, peroxisome, plasma membrane	30.74	33.48
CDY60883	Canola	cytosol	30.74	33.48
CDY37281	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	26.23	31.68
CDY19287	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	26.23	31.68
CDY44328	Canola	plasma membrane	23.77	31.35
CDY33452	Canola	plasma membrane	27.46	30.88
CDY38623	Canola	plasma membrane	23.36	30.81
CDY19288	Canola	extracellular, plasma membrane, vacuole	22.95	30.27
CDY34571	Canola	plasma membrane	26.64	29.95
CDX77630	Canola	plasma membrane	26.64	29.95
CDY38622	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.0	29.9
CDY37280	Canola	plasma membrane	22.54	29.73
CDY70034	Canola	cytosol, peroxisome, plasma membrane	29.1	29.46
CDX77629	Canola	cytosol, peroxisome, plasma membrane	29.1	29.46
CDY34726	Canola	cytosol, extracellular, peroxisome	18.85	28.75
CDY44329	Canola	endoplasmic reticulum, extracellular, vacuole	4.1	22.22
CDY38243	Canola	cytosol	12.3	22.06

Protein Annotations

EnsemblPlants:CDX74441	EnsemblPlantsGene:GSBRNA2T00114309001	GO:A0A078CBH5	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF11
PFAM:PF05078	ProteinID:CDX74441	ProteinID:CDX74441.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE1816
MapMan:13.7.1.4	:	:	:	:	:

Description

BnaA04g09480D

Coordinates

chrLK031801:-:333403..334137

Molecular Weight (calculated)

26599.8 Da

IEP (calculated)

8.361

GRAVY (calculated)

0.200

Length

244 amino acids

Sequence
(BLAST)

001: MEKTEESVGI RVYTTATPPQ KPSPPPSESQ KPVSISSLPT LPVGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: KTLMIHLLLL LCAMSCFFFH FTDSFKASDG NIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVSDDR YKLRVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPLM VGIVCSALFL VFPTTRYGVG CMSA

Best Arabidopsis Sequence Match ( AT5G39650.1 )
(BLAST)

001: MEKTEESVGI RVYTATPPQK PSPSPPSRSP KPVLISSLPS LPSGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG

Arabidopsis Description

DMP9Protein DMP9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK96]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.