Factsheet for GSMUA_Achr10P18790_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
plasma membrane 2
plastid 3
extracellular 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00920.t01	Wine grape	plastid	70.33	68.69
Zm00001d044822_P001	Maize	plastid	66.51	67.8
EER89477	Sorghum	plastid	66.51	65.57
Solyc05g007920.2.1	Tomato	cytosol	70.33	65.33
PGSC0003DMT400090619	Potato	cytosol	70.81	64.91
Bra006030.1-P	Field mustard	plasma membrane	55.98	61.9
KRG98781	Soybean	plasma membrane	63.16	61.68
KRG98790	Soybean	plasma membrane	61.72	60.28
AT1G09157.1	Thale cress	plastid	62.2	53.5
AT5G39650.1	Thale cress	plastid	61.72	52.87
CDX74441	Canola	plastid	61.72	52.87
Bra025657.1-P	Field mustard	plastid	61.72	52.87
CDY56548	Canola	plastid	60.29	52.07
CDX81135	Canola	plastid	60.29	52.07
CDY30259	Canola	plastid	28.23	44.36
GSMUA_Achr4P10580_001	Banana	cytosol	37.8	37.98
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	38.76	37.16
GSMUA_Achr4P02720_001	Banana	plasma membrane	36.84	36.49
GSMUA_Achr8P19660_001	Banana	cytosol	33.97	34.8
GSMUA_AchrUn_...	Banana	plastid	32.54	34.52
GSMUA_Achr11P...	Banana	plasma membrane	31.58	33.5
GSMUA_Achr6P08370_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	28.71	30.93
GSMUA_Achr10P...	Banana	cytosol	33.97	30.47
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	30.14	29.86
GSMUA_Achr8P32620_001	Banana	plasma membrane	29.67	28.7
GSMUA_Achr5P26860_001	Banana	plasma membrane	34.93	16.52

Protein Annotations

EnsemblPlants:GSMUA_Achr10P18790_001	EnsemblPlants:GSMUA_Achr10T18790_001	EnsemblPlantsGene:GSMUA_Achr10G18790_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF11	PFAM:PF05078	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002959512	UniProt:M0RJF4	MapMan:13.7.1.4	:	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G18790_001]

Coordinates

chr10:+:25370633..25371262

Molecular Weight (calculated)

22546.6 Da

IEP (calculated)

7.364

GRAVY (calculated)

0.285

Length

209 amino acids

Sequence
(BLAST)

001: MEPTVEHFEG PYSCPCSPRS TSPTSAGGGR RKRAVARGMQ KTLSKTSMLV NFLPTGTLLT FELLLPSASG DGSCSPVSTL MIETLLGLCA LSCFFFHFTD
101: SFRGPDGKVY YGFVTPRGLA VFKSGLGVDV PQDERFRMGF VDLVHALMAA MVFAAIALSD HRVTNCLFPG HAKEMDEVME SFPLMVGVVC SGLFLVFPNT
201: RYGIGCMAT

Best Arabidopsis Sequence Match ( AT1G09157.1 )
(BLAST)

001: MEKTEESVGI RVYTTTTTQN PSPTSSRSPK PVPLSSLPML PAGAAAGGGK GRKRRMVAKG VQKTVSKTSM LVNFLPTGTL LMFEMVLPTI YRDGDCNGIN
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST

Arabidopsis Description

DMP8Protein DMP8 [Source:UniProtKB/Swiss-Prot;Acc:O80493]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.