Factsheet for Solyc05g007920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400090619	Potato	cytosol	96.89	95.61
GSMUA_Achr10P...	Banana	plastid	65.33	70.33
VIT_14s0108g00920.t01	Wine grape	plastid	66.22	69.63
Bra006030.1-P	Field mustard	plasma membrane	53.78	64.02
KRG98781	Soybean	plasma membrane	60.89	64.02
KRG98790	Soybean	plasma membrane	60.44	63.55
Zm00001d044822_P001	Maize	plastid	55.11	60.49
EER89477	Sorghum	plastid	54.67	58.02
CDX74441	Canola	plastid	61.78	56.97
Bra025657.1-P	Field mustard	plastid	61.78	56.97
AT1G09157.1	Thale cress	plastid	61.33	56.79
CDX81135	Canola	plastid	60.89	56.61
CDY56548	Canola	plastid	60.44	56.2
AT5G39650.1	Thale cress	plastid	60.44	55.74
CDY30259	Canola	plastid	30.67	51.88
Solyc01g103580.2.1	Tomato	plasma membrane	36.44	36.94
Solyc02g077640.1.1	Tomato	plasma membrane	34.22	36.84
Solyc10g008970.1.1	Tomato	plasma membrane	35.11	36.07
Solyc12g005490.1.1	Tomato	plasma membrane	35.56	35.56
Solyc01g080490.2.1	Tomato	extracellular	26.22	33.91
Solyc10g050200.1.1	Tomato	plasma membrane	24.89	26.54

Protein Annotations

MapMan:13.7.1.4	InterPro:DMP	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150	GO:GO:0009705
GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030154
GO:GO:0048235	UniProt:K4BWW7	PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF11	EnsemblPlantsGene:Solyc05g007920.2
EnsemblPlants:Solyc05g007920.2.1	TMHMM:TMhelix	UniParc:UPI0002766081	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:+:2350007..2351451

Molecular Weight (calculated)

24694.6 Da

IEP (calculated)

8.584

GRAVY (calculated)

0.336

Length

225 amino acids

Sequence
(BLAST)

001: MEQTSEGIGI KMYSTSKRVD NSSSMYPTNL PQGEIIPELP IPIGGKKRRA MANGVQKTLS KTSLLVNFLP TGTLLTFEML LPSVFGKGDC SPITTFMILT
101: LLGLCTLSCF FFHFTDSFRG PDGKIYYGFV TPRGLKVFKT GLGVDVPKDE RYIVGVTDFV HAMMSVLVFV AIAFSDHRVT LCLFPGHAKE LDEIMRSFPL
201: MVGVICSGLF LVFPNSRYGV GCMSA

Best Arabidopsis Sequence Match ( AT1G09157.1 )
(BLAST)

001: MEKTEESVGI RVYTTTTTQN PSPTSSRSPK PVPLSSLPML PAGAAAGGGK GRKRRMVAKG VQKTVSKTSM LVNFLPTGTL LMFEMVLPTI YRDGDCNGIN
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST

Arabidopsis Description

DMP8Protein DMP8 [Source:UniProtKB/Swiss-Prot;Acc:O80493]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.