Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006030.1-P | Field mustard | plasma membrane | 78.1 | 100.0 |
| CDX81135 | Canola | plastid | 98.35 | 98.35 |
| AT5G39650.1 | Thale cress | plastid | 92.15 | 91.39 |
| CDX74441 | Canola | plastid | 90.08 | 89.34 |
| CDY30259 | Canola | plastid | 46.28 | 84.21 |
| VIT_14s0108g00920.t01 | Wine grape | plastid | 59.92 | 67.76 |
| KRG98790 | Soybean | plasma membrane | 57.02 | 64.49 |
| KRG98781 | Soybean | plasma membrane | 56.61 | 64.02 |
| Solyc05g007920.2.1 | Tomato | cytosol | 56.2 | 60.44 |
| GSMUA_Achr10P... | Banana | plastid | 52.07 | 60.29 |
| Zm00001d044822_P001 | Maize | plastid | 50.83 | 60.0 |
| PGSC0003DMT400090619 | Potato | cytosol | 55.79 | 59.21 |
| EER89477 | Sorghum | plastid | 50.41 | 57.55 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.34 | 35.5 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.93 | 35.0 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.1 | 34.0 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.1 | 34.0 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 29.34 | 33.18 |
| CDY24837 | Canola | plasma membrane, plastid | 29.75 | 32.88 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 28.93 | 32.71 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 28.93 | 32.71 |
| CDY34728 | Canola | plasma membrane, plastid | 29.34 | 32.13 |
| CDY03457 | Canola | plastid | 28.51 | 31.94 |
| CDY34278 | Canola | plasma membrane, plastid | 28.93 | 31.82 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 29.34 | 31.7 |
| CDY60883 | Canola | cytosol | 29.34 | 31.7 |
| CDY08933 | Canola | plasma membrane | 28.93 | 31.67 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.21 | 30.2 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.21 | 30.2 |
| CDY44328 | Canola | plasma membrane | 22.73 | 29.73 |
| CDY33452 | Canola | plasma membrane | 26.45 | 29.49 |
| CDY38623 | Canola | plasma membrane | 22.31 | 29.19 |
| CDY37280 | Canola | plasma membrane | 22.31 | 29.19 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.38 | 28.92 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 21.9 | 28.65 |
| CDY34571 | Canola | plasma membrane | 25.62 | 28.57 |
| CDX77630 | Canola | plasma membrane | 25.62 | 28.57 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 27.69 | 27.8 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 27.69 | 27.8 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 17.77 | 26.88 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 4.13 | 22.22 |
| CDY38243 | Canola | cytosol | 11.98 | 21.32 |
Protein Annotations
| EnsemblPlants:CDY56548 | EnsemblPlantsGene:GSBRNA2T00019729001 | GO:A0A078J0G3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF11 | PFAM:PF05078 | ProteinID:CDY56548 | ProteinID:CDY56548.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000058E018 | UniProt:A0A078J0G3 | MapMan:13.7.1.4 | : |
Description
BnaA03g55920DBnaA03g55920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0G3]
Coordinates
chrLK033498:-:39409..40137
Molecular Weight (calculated)
26325.6 Da
IEP (calculated)
8.875
GRAVY (calculated)
0.165
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTEESVGI RVYTPQKPSP SPPSRSPKPL LISSLPSLPP GAAAGGGRGR KRRMVAQGVQ KTVSKTSMIV NFLPTGTLLM FEMVLPSIYR DGDCNGINTL
101: MIHLLLLLCA TSCFFFHFTD SFKAADEKIY YGFVTPRGLA VFMKPPPPEC GGGGDAFAEA EIPVTDERYK LKVNDFVHAV MSVLVFMAIA FSDRRVTGCL
201: VPGKQKEMDQ VMESFPLMVG IVCSALFLVF PTTRRGVGCM SA
101: MIHLLLLLCA TSCFFFHFTD SFKAADEKIY YGFVTPRGLA VFMKPPPPEC GGGGDAFAEA EIPVTDERYK LKVNDFVHAV MSVLVFMAIA FSDRRVTGCL
201: VPGKQKEMDQ VMESFPLMVG IVCSALFLVF PTTRRGVGCM SA
001: MEKTEESVGI RVYTATPPQK PSPSPPSRSP KPVLISSLPS LPSGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
Arabidopsis Description
DMP9Protein DMP9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK96]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.